RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 IGKV1D-37A0A075B6S9 117 aa10.28□□□□□ -0.76
TRAPPC9-208ENST00000520857 PSMB11A5LHX3 300 aa10.28□□□□□ -0.76
TRAPPC9-208ENST00000520857 M0R3E3 92 aa10.28□□□□□ -0.76
TRAPPC9-208ENST00000520857 FABP2P12104 132 aa10.28□□□□□ -0.76
TRAPPC9-208ENST00000520857 CKS2P33552 79 aa10.28□□□□□ -0.76
TRAPPC9-208ENST00000520857 CR1LQ2VPA4 569 aa10.28□□□□□ -0.76
TRAPPC9-208ENST00000520857 PLSCR4Q9NRQ2 329 aa10.28□□□□□ -0.76
TRAPPC9-208ENST00000520857 NEU4Q8WWR8 484 aaPredicted RBP10.28□□□□□ -0.76
TRAPPC9-208ENST00000520857 ZNF747Q9BV97 191 aa10.28□□□□□ -0.76
TRAPPC9-208ENST00000520857 ZADH2Q8N4Q0 377 aa10.27□□□□□ -0.76
TRAPPC9-208ENST00000520857 SPRY4Q9C004 299 aa10.27□□□□□ -0.76
TRAPPC9-208ENST00000520857 SMKR1H3BMG3 65 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 LTAP01374 205 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 SP9P0CG40 484 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 FCGR2BP31994 310 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 Q71RC1 249 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 AMN1Q8IY45 258 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 OTORQ9NRC9 128 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 INSIG2Q9Y5U4 225 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 PIEZO2Q9H5I5 2752 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 COL6A3P12111 3177 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 M0R296 226 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 IGLC1P0CG04 106 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 FAM106CPP0CH98 169 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 FAM106AQ4KMX7 169 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 TMEM200BQ69YZ2 307 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 C8orf46Q8TAG6 207 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 TMEM186Q96B77 213 aa10.27□□□□□ -0.77
TRAPPC9-208ENST00000520857 PPIAL4EA0A075B759 164 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 TMEM213A2RRL7 107 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 TMEM189A5PLL7 270 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 CRXO43186 299 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 GNG7O60262 68 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 PPIAL4FP0DN26 164 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 TMEM11P17152 192 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 TWIST1Q15672 202 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 CT83Q5H943 113 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 RPRMLQ8N4K4 120 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 SCNM1Q9BWG6 230 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 FBXL15Q9H469 300 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 AAMDCQ9H7C9 122 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 JKAMPQ9P055 326 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 ZNF492Q9P255 531 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 PCSK5Q92824 1860 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 CNTFRP26992 372 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 TIMM23BQ5SRD1 257 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 LINC01545Q5VT33 79 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 RITA1Q96K30 269 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 PSG8Q9UQ74 426 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 TMEM238C9JI98 176 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 LHBP01229 141 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 FOXE3Q13461 319 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 RUSC1-AS1Q66K80 236 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 ZNF833PQ6ZTB9 187 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 C17orf77Q96MU5 243 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 MLST8Q9BVC4 326 aa10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 SLC25A39Q9BZJ4 359 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC9-208ENST00000520857 LOXL1Q08397 574 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 OR1N2Q8NGR9 330 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 COL25A1Q9BXS0 654 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 GFRA4Q9GZZ7 299 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 APC2O95996 2303 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 IL4P05112 153 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 MC5RP33032 325 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 PRSS22Q9GZN4 317 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 C7orf69Q9H7B7 122 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 KLF12Q9Y4X4 402 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 C19orf71A6NCJ1 209 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 C9orf118A6NHY6 69 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 HAX1O00165 279 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 GOSR1O95249 250 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 PAX2Q02962 417 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 HES1Q14469 280 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 ZNF474Q6S9Z5 364 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 LYZL1Q6UWQ5 148 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 ORMDL3Q8N138 153 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 THAP8Q8NA92 274 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 TRGV9Q99603 122 aa10.25□□□□□ -0.77
TRAPPC9-208ENST00000520857 PTPRBP23467 1997 aa10.24□□□□□ -0.77
TRAPPC9-208ENST00000520857 ORM1P02763 201 aa10.24□□□□□ -0.77
TRAPPC9-208ENST00000520857 PCP2Q8IVA1 136 aa10.24□□□□□ -0.77
TRAPPC9-208ENST00000520857 IFI27L1Q96BM0 104 aa10.24□□□□□ -0.77
TRAPPC9-208ENST00000520857 IGHG3P01860 377 aa10.24□□□□□ -0.77
TRAPPC9-208ENST00000520857 GP9P14770 177 aa10.24□□□□□ -0.77
TRAPPC9-208ENST00000520857 HSD52Q0P140 79 aa10.24□□□□□ -0.77
TRAPPC9-208ENST00000520857 RPEQ96AT9 228 aa10.24□□□□□ -0.77
TRAPPC9-208ENST00000520857 TMEM133Q9H2Q1 129 aa10.24□□□□□ -0.77
TRAPPC9-208ENST00000520857 LGALS7P47929 136 aa10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 IGHV3OR16-8A0A075B7F1 116 aa10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 SMAD7O15105 426 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 HBDP02042 147 aa10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 LYPD2Q6UXB3 125 aa10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 TMEM108Q6UXF1 575 aa10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 NGBQ9NPG2 151 aa10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 C1RLQ9NZP8 487 aa10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 IGHV3-35A0A0C4DH35 117 aa10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 VSTM5A8MXK1 200 aa10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 CD40P25942 277 aa10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 RPS20P60866 119 aaKnown RBP10.23□□□□□ -0.77
TRAPPC9-208ENST00000520857 TMEM30BQ3MIR4 351 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms