RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 GLMPQ8WWB7 406 aa11.55□□□□□ -0.56
LSM1-203ENST00000520755 RHPN1-AS1Q9BWJ2 59 aa11.55□□□□□ -0.56
LSM1-203ENST00000520755 SLC25A22Q9H936 323 aa11.55□□□□□ -0.56
LSM1-203ENST00000520755 TECRQ9NZ01 308 aaKnown RBP11.55□□□□□ -0.56
LSM1-203ENST00000520755 IZUMO1RA6ND01 250 aa11.54□□□□□ -0.56
LSM1-203ENST00000520755 MRPS12O15235 138 aaKnown RBP11.54□□□□□ -0.56
LSM1-203ENST00000520755 AKR1C8PQ5T2L2 129 aa11.54□□□□□ -0.56
LSM1-203ENST00000520755 C16orf54Q6UWD8 224 aa11.54□□□□□ -0.56
LSM1-203ENST00000520755 PHYHIPLQ96FC7 376 aa11.54□□□□□ -0.56
LSM1-203ENST00000520755 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
LSM1-203ENST00000520755 RNF2Q99496 336 aa11.54□□□□□ -0.56
LSM1-203ENST00000520755 SLC25A2Q9BXI2 301 aa11.54□□□□□ -0.56
LSM1-203ENST00000520755 MRPL32Q9BYC8 188 aaKnown RBP11.54□□□□□ -0.56
LSM1-203ENST00000520755 ZMAT5Q9UDW3 170 aaKnown RBP11.54□□□□□ -0.56
LSM1-203ENST00000520755 FUT9Q9Y231 359 aa11.54□□□□□ -0.56
LSM1-203ENST00000520755 MBP02144 154 aa11.53□□□□□ -0.56
LSM1-203ENST00000520755 CDC34P49427 236 aaPredicted RBP11.53□□□□□ -0.56
LSM1-203ENST00000520755 SULT1A2P50226 295 aa11.53□□□□□ -0.56
LSM1-203ENST00000520755 LCN12Q6JVE5 192 aa11.53□□□□□ -0.56
LSM1-203ENST00000520755 ZNF503Q96F45 646 aa11.53□□□□□ -0.56
LSM1-203ENST00000520755 C17orf77Q96MU5 243 aa11.53□□□□□ -0.56
LSM1-203ENST00000520755 PRR25Q96S07 402 aa11.53□□□□□ -0.56
LSM1-203ENST00000520755 ZNF256Q9Y2P7 627 aaPredicted RBP11.53□□□□□ -0.56
LSM1-203ENST00000520755 UMAD1C9J7I0 102 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 GP9P14770 177 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 RHOBP62745 196 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 DEFA6Q01524 100 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 IFITM2Q01629 132 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 GUCA2BQ16661 112 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 FAM90A2PQ658T7 463 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 TEX261Q6UWH6 196 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 TMEM61Q8N0U2 210 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 OR2K2Q8NGT1 345 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 NARS2Q96I59 477 aaKnown RBP11.52□□□□□ -0.57
LSM1-203ENST00000520755 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.57
LSM1-203ENST00000520755 NOTCH1P46531 2555 aa11.52□□□□□ -0.57
LSM1-203ENST00000520755 SORL1Q92673 2214 aa11.51□□□□□ -0.57
LSM1-203ENST00000520755 HMGB3O15347 200 aaKnown RBP11.51□□□□□ -0.57
LSM1-203ENST00000520755 BMI1P35226 326 aa11.51□□□□□ -0.57
LSM1-203ENST00000520755 C1orf194Q5T5A4 169 aa11.51□□□□□ -0.57
LSM1-203ENST00000520755 EIF5AL1Q6IS14 154 aaKnown RBP11.51□□□□□ -0.57
LSM1-203ENST00000520755 RBPMS2Q6ZRY4 209 aaKnown RBP11.51□□□□□ -0.57
LSM1-203ENST00000520755 RAB24Q969Q5 203 aa11.51□□□□□ -0.57
LSM1-203ENST00000520755 SMAD5-AS1Q9Y6J3 95 aa11.51□□□□□ -0.57
LSM1-203ENST00000520755 CTXND1A0A1B0GTU2 59 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 A0A1W2PS18 150 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 STAG3L2P0CL84 134 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 STAG3L3P0CL85 134 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 PYYP10082 97 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 SIGLEC15Q6ZMC9 328 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 TCF24Q7RTU0 167 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 OR8I2Q8N0Y5 310 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 ZNF680Q8NEM1 530 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 FAM213BQ8TBF2 198 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 GRAMD2BQ96HH9 432 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 ACTR3CQ9C0K3 210 aaPredicted RBP11.5□□□□□ -0.57
LSM1-203ENST00000520755 TMEM231Q9H6L2 316 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 DNAH3Q8TD57 4116 aa11.5□□□□□ -0.57
LSM1-203ENST00000520755 A0A1W2PPV4 95 aa11.49□□□□□ -0.57
LSM1-203ENST00000520755 IGLC2P0DOY2 106 aa11.49□□□□□ -0.57
LSM1-203ENST00000520755 KHDC3LQ587J8 217 aa11.49□□□□□ -0.57
LSM1-203ENST00000520755 DPPA3Q6W0C5 159 aa11.49□□□□□ -0.57
LSM1-203ENST00000520755 TMEM14CQ9P0S9 112 aa11.49□□□□□ -0.57
LSM1-203ENST00000520755 IGKV3-7A0A075B6H7 116 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 TRAV25A0A0B4J276 109 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 MAP1LC3B2A6NCE7 125 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 ZNF785A8K8V0 405 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 SNRPCP09234 159 aaKnown RBP11.48□□□□□ -0.57
LSM1-203ENST00000520755 ARL14EPLP0DKL9 152 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 RPL7P18124 248 aaKnown RBP11.48□□□□□ -0.57
LSM1-203ENST00000520755 RAB5CP51148 216 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 RPL11P62913 178 aaKnown RBP11.48□□□□□ -0.57
LSM1-203ENST00000520755 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 S100A7AQ86SG5 101 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 FXYD5Q96DB9 178 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 MAP1LC3BQ9GZQ8 125 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 PFDN2Q9UHV9 154 aa11.48□□□□□ -0.57
LSM1-203ENST00000520755 A0A087X0K7 114 aa11.47□□□□□ -0.57
LSM1-203ENST00000520755 H3BQ15 152 aa11.47□□□□□ -0.57
LSM1-203ENST00000520755 OR7C2O60412 319 aa11.47□□□□□ -0.57
LSM1-203ENST00000520755 S100A7P31151 101 aa11.47□□□□□ -0.57
LSM1-203ENST00000520755 FGF8P55075 233 aaPredicted RBP11.47□□□□□ -0.57
LSM1-203ENST00000520755 LCN15Q6UWW0 184 aa11.47□□□□□ -0.57
LSM1-203ENST00000520755 BPIFA4PQ86YQ2 179 aa11.47□□□□□ -0.57
LSM1-203ENST00000520755 MBD3L1Q8WWY6 194 aa11.47□□□□□ -0.57
LSM1-203ENST00000520755 GPR82Q96P67 336 aa11.47□□□□□ -0.57
LSM1-203ENST00000520755 ZNF586Q9NXT0 402 aa11.47□□□□□ -0.57
LSM1-203ENST00000520755 FBN3Q75N90 2809 aa11.47□□□□□ -0.57
LSM1-203ENST00000520755 HELTA6NFD8 242 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 H3BTX0 84 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 K7EIL1 84 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 SLC17A3O00476 420 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 SOCS3O14543 225 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 TSPAN4O14817 238 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 OR10J4P0C629 311 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 GALR1P47211 349 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 TFPI2P48307 235 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 TAS2R45P59539 299 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 GTSCR1Q86UQ5 136 aa11.46□□□□□ -0.57
LSM1-203ENST00000520755 GBGT1Q8N5D6 347 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms