RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 SCRT1Q9BWW7 348 aa13.04□□□□□ -0.32
TRAM1-203ENST00000520700 MS4A6AQ9H2W1 248 aa13.04□□□□□ -0.32
TRAM1-203ENST00000520700 MRPS12O15235 138 aaKnown RBP13.03□□□□□ -0.32
TRAM1-203ENST00000520700 MBP02144 154 aa13.03□□□□□ -0.32
TRAM1-203ENST00000520700 M6PRP20645 277 aa13.03□□□□□ -0.32
TRAM1-203ENST00000520700 GALR1P47211 349 aa13.03□□□□□ -0.32
TRAM1-203ENST00000520700 EIF5AP63241 154 aaKnown RBP13.03□□□□□ -0.32
TRAM1-203ENST00000520700 ACOT6Q3I5F7 207 aaPredicted RBP13.03□□□□□ -0.32
TRAM1-203ENST00000520700 GCSAMLQ5JQS6 135 aa13.03□□□□□ -0.32
TRAM1-203ENST00000520700 Q8N1Y9 231 aa13.03□□□□□ -0.32
TRAM1-203ENST00000520700 DCANP1Q8TF63 244 aa13.03□□□□□ -0.32
TRAM1-203ENST00000520700 MRPL32Q9BYC8 188 aaKnown RBP13.03□□□□□ -0.32
TRAM1-203ENST00000520700 SLC25A32Q9H2D1 315 aa13.03□□□□□ -0.32
TRAM1-203ENST00000520700 NRN1Q9NPD7 142 aa13.03□□□□□ -0.32
TRAM1-203ENST00000520700 SELENOKQ9Y6D0 94 aa13.03□□□□□ -0.32
TRAM1-203ENST00000520700 K7EQG2 157 aa13.02□□□□□ -0.33
TRAM1-203ENST00000520700 MEOX2P50222 304 aa13.02□□□□□ -0.33
TRAM1-203ENST00000520700 RPL11P62913 178 aaKnown RBP13.02□□□□□ -0.33
TRAM1-203ENST00000520700 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.33
TRAM1-203ENST00000520700 LEMD1Q68G75 181 aa13.02□□□□□ -0.33
TRAM1-203ENST00000520700 SLC25A22Q9H936 323 aa13.02□□□□□ -0.33
TRAM1-203ENST00000520700 AURKAIP1Q9NWT8 199 aaPredicted RBP13.02□□□□□ -0.33
TRAM1-203ENST00000520700 RFNGQ9Y644 331 aa13.02□□□□□ -0.33
TRAM1-203ENST00000520700 SMAD5-AS1Q9Y6J3 95 aa13.02□□□□□ -0.33
TRAM1-203ENST00000520700 A0A087X0K7 114 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 DNASE2O00115 360 aaPredicted RBP13.01□□□□□ -0.33
TRAM1-203ENST00000520700 PFDN1O60925 122 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 SPP1P10451 314 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 FAM78BQ5VT40 261 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 MORN5Q5VZ52 161 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 GTSCR1Q86UQ5 136 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 BPIFA4PQ86YQ2 179 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 C9orf62Q8N4C0 152 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 STOML3Q8TAV4 291 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 C17orf77Q96MU5 243 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 PRR25Q96S07 402 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 C19orf73Q9NVV2 129 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 TMEM14CQ9P0S9 112 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 FUT9Q9Y231 359 aa13.01□□□□□ -0.33
TRAM1-203ENST00000520700 SEC11BP0C7V7 166 aa13□□□□□ -0.33
TRAM1-203ENST00000520700 C4BPBP20851 252 aa13□□□□□ -0.33
TRAM1-203ENST00000520700 RHOBP62745 196 aa13□□□□□ -0.33
TRAM1-203ENST00000520700 BAP18Q8IXM2 172 aa13□□□□□ -0.33
TRAM1-203ENST00000520700 GBGT1Q8N5D6 347 aa13□□□□□ -0.33
TRAM1-203ENST00000520700 STXBP6Q8NFX7 210 aa13□□□□□ -0.33
TRAM1-203ENST00000520700 ZNF471Q9BX82 626 aaPredicted RBP13□□□□□ -0.33
TRAM1-203ENST00000520700 A8MZ25 164 aa12.99□□□□□ -0.33
TRAM1-203ENST00000520700 CD7P09564 240 aa12.99□□□□□ -0.33
TRAM1-203ENST00000520700 OR10G4Q8NGN3 311 aa12.99□□□□□ -0.33
TRAM1-203ENST00000520700 OR10G9Q8NGN4 311 aa12.99□□□□□ -0.33
TRAM1-203ENST00000520700 OR10G7Q8NGN6 311 aa12.99□□□□□ -0.33
TRAM1-203ENST00000520700 FAM167A-AS1Q96KT0 104 aa12.99□□□□□ -0.33
TRAM1-203ENST00000520700 SH3BGRL3Q9H299 93 aa12.99□□□□□ -0.33
TRAM1-203ENST00000520700 FBN3Q75N90 2809 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 IGKV3-7A0A075B6H7 116 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 TRAV5A0A0B4J249 113 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 K7EIL1 84 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 SOCS3O14543 225 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 IGLC2P0DOY2 106 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 TPT1P13693 172 aaKnown RBP12.98□□□□□ -0.33
TRAM1-203ENST00000520700 CD81P60033 236 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 GUK1Q16774 197 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 MIR17HGQ75NE6 70 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 SLC51BQ86UW2 128 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 RPP25LQ8N5L8 163 aaKnown RBP12.98□□□□□ -0.33
TRAM1-203ENST00000520700 HRH4Q9H3N8 390 aa12.98□□□□□ -0.33
TRAM1-203ENST00000520700 ISLRO14498 428 aa12.97□□□□□ -0.33
TRAM1-203ENST00000520700 ATF4P18848 351 aaPredicted RBP12.97□□□□□ -0.33
TRAM1-203ENST00000520700 TFPI2P48307 235 aa12.97□□□□□ -0.33
TRAM1-203ENST00000520700 TAS2R45P59539 299 aa12.97□□□□□ -0.33
TRAM1-203ENST00000520700 RAB2AP61019 212 aa12.97□□□□□ -0.33
TRAM1-203ENST00000520700 ODF3L2Q3SX64 289 aa12.97□□□□□ -0.33
TRAM1-203ENST00000520700 TMEM41BQ5BJD5 291 aa12.97□□□□□ -0.33
TRAM1-203ENST00000520700 SPATA31B1PQ5VZV4 182 aa12.97□□□□□ -0.33
TRAM1-203ENST00000520700 WFDC3Q8IUB2 231 aa12.97□□□□□ -0.33
TRAM1-203ENST00000520700 SLC25A2Q9BXI2 301 aa12.97□□□□□ -0.33
TRAM1-203ENST00000520700 RPRMQ9NS64 109 aa12.97□□□□□ -0.33
TRAM1-203ENST00000520700 A0A1W2PPV4 95 aa12.96□□□□□ -0.33
TRAM1-203ENST00000520700 ZNF253O75346 499 aa12.96□□□□□ -0.33
TRAM1-203ENST00000520700 HIST1H1EP10412 219 aaKnown RBP12.96□□□□□ -0.33
TRAM1-203ENST00000520700 ID1P41134 155 aa12.96□□□□□ -0.33
TRAM1-203ENST00000520700 PSMB3P49720 205 aa12.96□□□□□ -0.33
TRAM1-203ENST00000520700 DEFA6Q01524 100 aa12.96□□□□□ -0.33
TRAM1-203ENST00000520700 MEGF8Q7Z7M0 2845 aa12.96□□□□□ -0.34
TRAM1-203ENST00000520700 OR11H12B2RN74 326 aa12.95□□□□□ -0.34
TRAM1-203ENST00000520700 UMAD1C9J7I0 102 aa12.95□□□□□ -0.34
TRAM1-203ENST00000520700 PRB2P02812 416 aaPredicted RBP12.95□□□□□ -0.34
TRAM1-203ENST00000520700 SNRPD3P62318 126 aaKnown RBP12.95□□□□□ -0.34
TRAM1-203ENST00000520700 EIF5AL1Q6IS14 154 aaKnown RBP12.95□□□□□ -0.34
TRAM1-203ENST00000520700 SAT2Q96F10 170 aaPredicted RBP12.95□□□□□ -0.34
TRAM1-203ENST00000520700 ACTR3CQ9C0K3 210 aaPredicted RBP12.95□□□□□ -0.34
TRAM1-203ENST00000520700 OR51M1Q9H341 326 aa12.95□□□□□ -0.34
TRAM1-203ENST00000520700 MAP6D1Q9H9H5 199 aa12.95□□□□□ -0.34
TRAM1-203ENST00000520700 CLEC5AQ9NY25 188 aa12.95□□□□□ -0.34
TRAM1-203ENST00000520700 H3BQ15 152 aa12.94□□□□□ -0.34
TRAM1-203ENST00000520700 CDC34P49427 236 aaPredicted RBP12.94□□□□□ -0.34
TRAM1-203ENST00000520700 PDE6HQ13956 83 aa12.94□□□□□ -0.34
TRAM1-203ENST00000520700 KHDC3LQ587J8 217 aa12.94□□□□□ -0.34
TRAM1-203ENST00000520700 AKR1C8PQ5T2L2 129 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms