RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 METTL26Q96S19 204 aa8.09□□□□□ -1.11
MCF2-209ENST00000520602 TRAV9-1A0A075B6T8 112 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.09□□□□□ -1.12
MCF2-209ENST00000520602 LOC389332A0A1B0GUA5 103 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 IGLC1P0CG04 106 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 HBBP68871 147 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 MINOS1Q5TGZ0 78 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 RUSC1-AS1Q66K80 236 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 ATOH7Q8N100 152 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 Q8N7P7 452 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 FXYD5Q96DB9 178 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 KLF2Q9Y5W3 355 aaPredicted RBP8.09□□□□□ -1.12
MCF2-209ENST00000520602 SELENOKQ9Y6D0 94 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 LY96Q9Y6Y9 160 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 MINOS1-NBL1R4GNA1 71 aa8.09□□□□□ -1.12
MCF2-209ENST00000520602 NDUFB8O95169 186 aa8.08□□□□□ -1.12
MCF2-209ENST00000520602 JOSD1Q15040 202 aaPredicted RBP8.08□□□□□ -1.12
MCF2-209ENST00000520602 WFDC3Q8IUB2 231 aa8.08□□□□□ -1.12
MCF2-209ENST00000520602 TBL2Q9Y4P3 447 aaKnown RBP8.08□□□□□ -1.12
MCF2-209ENST00000520602 S100A4P26447 101 aaKnown RBP8.08□□□□□ -1.12
MCF2-209ENST00000520602 FAM162BQ5T6X4 162 aa8.08□□□□□ -1.12
MCF2-209ENST00000520602 CDPF1Q6NVV7 123 aa8.08□□□□□ -1.12
MCF2-209ENST00000520602 THAP8Q8NA92 274 aa8.08□□□□□ -1.12
MCF2-209ENST00000520602 V9GYV3 84 aa8.08□□□□□ -1.12
MCF2-209ENST00000520602 EEF1AKMT3Q96AZ1 226 aa8.08□□□□□ -1.12
MCF2-209ENST00000520602 GNB1LQ9BYB4 327 aa8.08□□□□□ -1.12
MCF2-209ENST00000520602 PSG8Q9UQ74 426 aa8.08□□□□□ -1.12
MCF2-209ENST00000520602 G3V318 75 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 NPFFO15130 113 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 ZFP36P26651 326 aaKnown RBP8.07□□□□□ -1.12
MCF2-209ENST00000520602 NUP35Q8NFH5 326 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 FAM167A-AS1Q96KT0 104 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 A6NNC1 897 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 FCN3O75636 299 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 COX6B1P14854 86 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 PSG9Q00887 426 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 FAM120AOSQ5T036 256 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 TSKUQ8WUA8 353 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 ZNF503Q96F45 646 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 C1orf159Q96HA4 380 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 C16orf92Q96LL3 132 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 NAV2Q8IVL1 2488 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 TYMSP04818 313 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 PYGO2Q9BRQ0 406 aa8.07□□□□□ -1.12
MCF2-209ENST00000520602 TLN2Q9Y4G6 2542 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 OOSP1A8MZH6 123 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 TWIST1Q15672 202 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 C17orf77Q96MU5 243 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 IGKV2-40A0A087WW87 121 aaPredicted RBP8.06□□□□□ -1.12
MCF2-209ENST00000520602 IGKV2D-40P01614 121 aaPredicted RBP8.06□□□□□ -1.12
MCF2-209ENST00000520602 FRMD6-AS1P0C7T7 363 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 C11orf42Q8N5U0 333 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 OR11H6Q8NGC7 330 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 UFC1Q9Y3C8 167 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 COL27A1Q8IZC6 1860 aaPredicted RBP8.06□□□□□ -1.12
MCF2-209ENST00000520602 DMXL2Q8TDJ6 3036 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 IGHV2-70DA0A0C4DH43 119 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 TFPI2P48307 235 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 RBPMS2Q6ZRY4 209 aaKnown RBP8.06□□□□□ -1.12
MCF2-209ENST00000520602 PKD1L2Q7Z442 2459 aa8.06□□□□□ -1.12
MCF2-209ENST00000520602 USP9XQ93008 2570 aaPredicted RBP8.05□□□□□ -1.12
MCF2-209ENST00000520602 TEX22C9J3V5 150 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 ATP6V0E1O15342 81 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 UBE2E1P51965 193 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 TMEM78Q5T7P6 136 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 YPEL4Q96NS1 127 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 SHANK2-AS3Q9BTD1 123 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 IGKV1D-37A0A075B6S9 117 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 TGFAP01135 160 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 IGKV1-17P01599 117 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 NRN1Q9NPD7 142 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 A0A1B0GUT8 65 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 TOMM40O96008 361 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 KLHDC1Q8N7A1 406 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 ZNF738Q8NE65 137 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 Q8TAT8 98 aa8.05□□□□□ -1.12
MCF2-209ENST00000520602 ITLN2Q8WWU7 325 aaPredicted RBP8.05□□□□□ -1.12
MCF2-209ENST00000520602 LRRK2Q5S007 2527 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 NPIPB5A8MRT5 1133 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 HNRNPA3P51991 378 aaKnown RBP8.04□□□□□ -1.12
MCF2-209ENST00000520602 MAPK1IP1LQ8NDC0 245 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 TET2Q6N021 2002 aaPredicted RBP8.04□□□□□ -1.12
MCF2-209ENST00000520602 IFITM10A6NMD0 228 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 H3BUX3 64 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 K7EIM0 57 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 BMI1P35226 326 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 C19orf84I3L1E1 186 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 I3L2K1 104 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 HOXB4P17483 251 aaPredicted RBP8.04□□□□□ -1.12
MCF2-209ENST00000520602 NDPQ00604 133 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 SAPCD1Q5SSQ6 148 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 Q6ZN92 141 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 ZNF491Q8N8L2 437 aa8.04□□□□□ -1.12
MCF2-209ENST00000520602 MYO9AB2RTY4 2548 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 TNFRSF13BO14836 293 aaPredicted RBP8.03□□□□□ -1.12
MCF2-209ENST00000520602 SRSF8Q9BRL6 282 aaKnown RBP8.03□□□□□ -1.12
MCF2-209ENST00000520602 PPIFP30405 207 aaKnown RBP8.03□□□□□ -1.12
MCF2-209ENST00000520602 TCTAP57738 103 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 TRAV41A0A0B4J266 112 aa8.03□□□□□ -1.12
MCF2-209ENST00000520602 F2Z2F3 143 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms