RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 ATF4P18848 351 aaPredicted RBP6.84□□□□□ -1.31
CSMD1-208ENST00000520561 GCHFRP30047 84 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 MYCNOSP40205 109 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 PSMB3P49720 205 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 PPT1P50897 306 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 KLF5Q13887 457 aaPredicted RBP6.84□□□□□ -1.31
CSMD1-208ENST00000520561 TM4SF20Q53R12 229 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 C1orf194Q5T5A4 169 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 OR9G4Q8NGQ1 327 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 MARC2Q969Z3 335 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 FAM167A-AS1Q96KT0 104 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 GPR82Q96P67 336 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 ELOVL1Q9BW60 279 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 OR51M1Q9H341 326 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 MANBALQ9NQG1 85 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 TMEM14CQ9P0S9 112 aa6.84□□□□□ -1.31
CSMD1-208ENST00000520561 TEP1Q99973 2627 aaKnown RBP6.84□□□□□ -1.31
CSMD1-208ENST00000520561 IGHV3-66A0A0C4DH42 116 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 TMEM213A2RRL7 107 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 C2orf70A6NJV1 201 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 OVOL1O14753 267 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 BUB3O43684 328 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 PYYP10082 97 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 GP9P14770 177 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 GALR1P47211 349 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 C3orf56Q8N813 242 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 LYPD6BQ8NI32 183 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 DYNLRB2Q8TF09 96 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 DLX4Q92988 240 aaPredicted RBP6.83□□□□□ -1.32
CSMD1-208ENST00000520561 ZNF747Q9BV97 191 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 RHPN1-AS1Q9BWJ2 59 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 GNG13Q9P2W3 67 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 SMPXQ9UHP9 88 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 U3KQE9 123 aa6.83□□□□□ -1.32
CSMD1-208ENST00000520561 IGHV3OR16-13A0A075B7E8 117 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 IGHV3-74A0A0B4J1X5 117 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 HELTA6NFD8 242 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 CHEK1O14757 476 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 APOHP02749 345 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-208ENST00000520561 OR10J4P0C629 311 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 HIST1H1EP10412 219 aaKnown RBP6.82□□□□□ -1.32
CSMD1-208ENST00000520561 TAGLN2P37802 199 aaKnown RBP6.82□□□□□ -1.32
CSMD1-208ENST00000520561 MEOX2P50222 304 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 NDUFA5Q16718 116 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 C16orf54Q6UWD8 224 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 SHISA2Q6UWI4 295 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 SIGLEC15Q6ZMC9 328 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 COMMD7Q86VX2 200 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 GLMPQ8WWB7 406 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 ZNF503Q96F45 646 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 TMPRSS5Q9H3S3 457 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 MED9Q9NWA0 146 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 JMJD1CQ15652 2540 aa6.82□□□□□ -1.32
CSMD1-208ENST00000520561 LINC00862A6NCI5 91 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 ZNF785A8K8V0 405 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 CD5P06127 495 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 BCL2P10415 239 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 FOLR2P14207 255 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 CCL20P78556 96 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 GUK1Q16774 197 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 TOR2AQ5JU69 321 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 LURAP1LQ8IV03 231 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 BLNKQ8WV28 456 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 FXYD5Q96DB9 178 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 FAM210AQ96ND0 272 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 ARL2-SNX15V9GYD0 113 aa6.81□□□□□ -1.32
CSMD1-208ENST00000520561 A0A087X0K7 114 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 LOC102723971A0A1B0GUV8 181 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 RAB19A4D1S5 217 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 RBFOX3A6NFN3 312 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 MRPS12O15235 138 aaKnown RBP6.8□□□□□ -1.32
CSMD1-208ENST00000520561 PAGE4O60829 102 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 NBEAP1P0C6P0 100 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 IGLC2P0DOY2 106 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 EDN2P20800 178 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 CBLN1P23435 193 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 UBE2G2P60604 165 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 RPL11P62913 178 aaKnown RBP6.8□□□□□ -1.32
CSMD1-208ENST00000520561 PMS2P11Q13670 270 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 PDE6HQ13956 83 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 HAGHQ16775 308 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 SAMD13Q5VXD3 122 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 CST9LP1Q5W188 147 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 TCF24Q7RTU0 167 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 SUN5Q8TC36 379 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 EIF5A2Q9GZV4 153 aaKnown RBP6.8□□□□□ -1.32
CSMD1-208ENST00000520561 VAX2Q9UIW0 290 aa6.8□□□□□ -1.32
CSMD1-208ENST00000520561 TRBV19A0A075B6N1 114 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 A0A1W2PRE2 83 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 FAM74A7A6NL05 159 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 H3BQ15 152 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 H3BTX0 84 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 ZNF253O75346 499 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 CSN3P07498 182 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 SNRPCP09234 159 aaKnown RBP6.79□□□□□ -1.32
CSMD1-208ENST00000520561 PSG9Q00887 426 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 MEF2BQ02080 365 aaPredicted RBP6.79□□□□□ -1.32
CSMD1-208ENST00000520561 PEA15Q15121 130 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 ZNF506Q5JVG8 444 aa6.79□□□□□ -1.32
CSMD1-208ENST00000520561 LINC00482Q8N8I6 264 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms