RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 NPSP0C0P6 89 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 GPX4P36969 197 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 NPBWR1P48145 328 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 TFPI2P48307 235 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 TMEM187Q14656 261 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 SPINK9Q5DT21 86 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 LGI3Q8N145 548 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 TMEM217Q8N7C4 229 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 SFT2D1Q8WV19 159 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 PINX1Q96BK5 328 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 TP53RKQ96S44 253 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 VSIRQ9H7M9 311 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 KMT2AQ03164 3969 aa6.8□□□□□ -1.32
CTNNA1-221ENST00000520339 IGKV3-7A0A075B6H7 116 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 G3V3Q6 166 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 DNASE2O00115 360 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 ST8SIA3O43173 380 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 LY6G6CO95867 125 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 CD5P06127 495 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 RNASE2P10153 161 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 CYCSP99999 105 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 TCF24Q7RTU0 167 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 C9orf62Q8N4C0 152 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 GBGT1Q8N5D6 347 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 LRTM2Q8N967 370 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 GINS3Q9BRX5 216 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 NMES1Q9C002 83 aa6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 MRPL36Q9P0J6 103 aaKnown RBP6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 KLK5Q9Y337 293 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 PUS1Q9Y606 427 aaKnown RBP eCLIP6.79□□□□□ -1.32
CTNNA1-221ENST00000520339 TRAV2A0A0B4J234 112 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 A0A0G2JRQ6 117 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 A0A1B0GU03 582 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 DUXBA0A1W2PPF3 345 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 ADAP1O75689 374 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 DFFBO76075 338 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 ATG12O94817 140 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 IFNA17P01571 189 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 HOXB5P09067 269 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 LINC00614P0C842 121 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 PET100P0DJ07 73 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 UCP1P25874 307 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 SNCAP37840 140 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 PAFAH1B2P68402 229 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 SP6Q3SY56 376 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 TMEM268Q5VZI3 342 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 GATAD1Q8WUU5 269 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 PHLDA1Q8WV24 401 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 GLMPQ8WWB7 406 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 IL22RA2Q969J5 263 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 C2orf50Q96LR7 162 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 RARRES2Q99969 163 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 TMEM222Q9H0R3 208 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 MS4A6AQ9H2W1 248 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 FNDC4Q9H6D8 234 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 HSPB11Q9Y547 144 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 DNAH10Q8IVF4 4471 aa6.78□□□□□ -1.32
CTNNA1-221ENST00000520339 FXYD6-FXYD2A0A087WZ82 144 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 IGHV3-66A0A0C4DH42 116 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 CORTO00230 105 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 MBP02144 154 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 AKR1C2P52895 323 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 SUB1P53999 127 aaKnown RBP eCLIP6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 DEFB131AP59861 70 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 VAMP2P63027 116 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 FOXI1Q12951 378 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 IAH1Q2TAA2 248 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 BSXQ3C1V8 233 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 LRRC37A5PQ49AS3 106 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 GGNBP1Q5YKI7 109 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 FAM24BQ8N5W8 94 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 SLC35G3Q8N808 338 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 OR11H4Q8NGC9 324 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 OR4X1Q8NH49 305 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 GLYATL2Q8WU03 294 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 PPP1R1CQ8WVI7 109 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 TMED3Q9Y3Q3 217 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 TMEM56-RWDD3S4R434 201 aa6.77□□□□□ -1.33
CTNNA1-221ENST00000520339 HMSDA8MTL9 139 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 CDS2O95674 445 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 IGKV1-17P01599 117 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 MBPP02686 304 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 GIG44P09565 113 aaPredicted RBP6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 NPPCP23582 126 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 CRYBB3P26998 211 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 S100A10P60903 97 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 GAGE1Q13065 139 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 LEMD1Q68G75 181 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 LYZL2Q7Z4W2 148 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 SELENOHQ8IZQ5 122 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 OR11H2Q8NH07 326 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 OR52E5Q8NH55 327 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 THAP6Q8TBB0 222 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 RRNAD1Q96FB5 475 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 C11orf68Q9H3H3 251 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 TMEM231Q9H6L2 316 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 ENY2Q9NPA8 101 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 NIT2Q9NQR4 276 aa6.76□□□□□ -1.33
CTNNA1-221ENST00000520339 A0A1W2PS18 150 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms