RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 TRAV25A0A0B4J276 109 aa13.43□□□□□ -0.26
SDC2-205ENST00000520233 A0A1W2PPV4 95 aa13.43□□□□□ -0.26
SDC2-205ENST00000520233 HELTA6NFD8 242 aa13.43□□□□□ -0.26
SDC2-205ENST00000520233 CD300EQ496F6 205 aaPredicted RBP13.43□□□□□ -0.26
SDC2-205ENST00000520233 SPATA31B1PQ5VZV4 182 aa13.43□□□□□ -0.26
SDC2-205ENST00000520233 FAM122CQ6P4D5 195 aa13.43□□□□□ -0.26
SDC2-205ENST00000520233 MIR17HGQ75NE6 70 aa13.43□□□□□ -0.26
SDC2-205ENST00000520233 TCF24Q7RTU0 167 aa13.43□□□□□ -0.26
SDC2-205ENST00000520233 TRAV5A0A0B4J249 113 aa13.42□□□□□ -0.26
SDC2-205ENST00000520233 RPL7P18124 248 aaKnown RBP13.42□□□□□ -0.26
SDC2-205ENST00000520233 CDC34P49427 236 aaPredicted RBP13.42□□□□□ -0.26
SDC2-205ENST00000520233 SIGLEC15Q6ZMC9 328 aa13.42□□□□□ -0.26
SDC2-205ENST00000520233 ACTR3CQ9C0K3 210 aaPredicted RBP13.42□□□□□ -0.26
SDC2-205ENST00000520233 SELENOKQ9Y6D0 94 aa13.42□□□□□ -0.26
SDC2-205ENST00000520233 MRPS12O15235 138 aaKnown RBP13.41□□□□□ -0.26
SDC2-205ENST00000520233 DPPA3Q6W0C5 159 aa13.41□□□□□ -0.26
SDC2-205ENST00000520233 RBPMS2Q6ZRY4 209 aaKnown RBP13.41□□□□□ -0.26
SDC2-205ENST00000520233 BPIFA4PQ86YQ2 179 aa13.41□□□□□ -0.26
SDC2-205ENST00000520233 TMEM61Q8N0U2 210 aa13.41□□□□□ -0.26
SDC2-205ENST00000520233 FAM167A-AS1Q96KT0 104 aa13.41□□□□□ -0.26
SDC2-205ENST00000520233 SLC25A2Q9BXI2 301 aa13.41□□□□□ -0.26
SDC2-205ENST00000520233 TSPAN4O14817 238 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 GALR1P47211 349 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 SULT1A2P50226 295 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 RAB5CP51148 216 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 TAS2R45P59539 299 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 KHDC3LQ587J8 217 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 OXLD1Q5BKU9 147 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 LCN12Q6JVE5 192 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 STXBP6Q8NFX7 210 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 RAB24Q969Q5 203 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 TMEM14CQ9P0S9 112 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 SMAD5-AS1Q9Y6J3 95 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 WNK1Q9H4A3 2382 aa13.4□□□□□ -0.26
SDC2-205ENST00000520233 CTXND1A0A1B0GTU2 59 aa13.39□□□□□ -0.27
SDC2-205ENST00000520233 RPL11P62913 178 aaKnown RBP13.39□□□□□ -0.27
SDC2-205ENST00000520233 ZNF726P1Q15940 193 aa13.39□□□□□ -0.27
SDC2-205ENST00000520233 ALKAL2Q6UX46 152 aa13.39□□□□□ -0.27
SDC2-205ENST00000520233 IZUMO1RA6ND01 250 aa13.38□□□□□ -0.27
SDC2-205ENST00000520233 STAG3L2P0CL84 134 aa13.38□□□□□ -0.27
SDC2-205ENST00000520233 STAG3L3P0CL85 134 aa13.38□□□□□ -0.27
SDC2-205ENST00000520233 GP9P14770 177 aa13.38□□□□□ -0.27
SDC2-205ENST00000520233 PAFAH1B2P68402 229 aa13.38□□□□□ -0.27
SDC2-205ENST00000520233 SAMD5Q5TGI4 173 aa13.38□□□□□ -0.27
SDC2-205ENST00000520233 SPAG8Q99932 426 aaPredicted RBP13.38□□□□□ -0.27
SDC2-205ENST00000520233 OR51M1Q9H341 326 aa13.38□□□□□ -0.27
SDC2-205ENST00000520233 ANK2Q01484 3957 aa13.38□□□□□ -0.27
SDC2-205ENST00000520233 IGKV3-7A0A075B6H7 116 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 A0A087X0K7 114 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 TRAV2A0A0B4J234 112 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 ZNF785A8K8V0 405 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 OR7C2O60412 319 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 EIF3GO75821 320 aaKnown RBP eCLIP13.37□□□□□ -0.27
SDC2-205ENST00000520233 ATF4P18848 351 aaPredicted RBP13.37□□□□□ -0.27
SDC2-205ENST00000520233 FHITP49789 147 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 PQLC2Q6ZP29 291 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 SSX7Q7RTT5 188 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 FAM213BQ8TBF2 198 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 PAXXQ9BUH6 204 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 MS4A6AQ9H2W1 248 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 NRN1Q9NPD7 142 aa13.37□□□□□ -0.27
SDC2-205ENST00000520233 HMGB3O15347 200 aaKnown RBP13.36□□□□□ -0.27
SDC2-205ENST00000520233 IGLC2P0DOY2 106 aa13.36□□□□□ -0.27
SDC2-205ENST00000520233 MEOX2P50222 304 aa13.36□□□□□ -0.27
SDC2-205ENST00000520233 GUCA2BQ16661 112 aa13.36□□□□□ -0.27
SDC2-205ENST00000520233 FAM74A1Q5RGS3 127 aa13.36□□□□□ -0.27
SDC2-205ENST00000520233 TEX261Q6UWH6 196 aa13.36□□□□□ -0.27
SDC2-205ENST00000520233 GBGT1Q8N5D6 347 aa13.36□□□□□ -0.27
SDC2-205ENST00000520233 RNF141Q8WVD5 230 aa13.36□□□□□ -0.27
SDC2-205ENST00000520233 ZNF503Q96F45 646 aa13.36□□□□□ -0.27
SDC2-205ENST00000520233 C17orf77Q96MU5 243 aa13.36□□□□□ -0.27
SDC2-205ENST00000520233 HRH4Q9H3N8 390 aa13.36□□□□□ -0.27
SDC2-205ENST00000520233 G3V4G9 280 aa13.35□□□□□ -0.27
SDC2-205ENST00000520233 H3BQ15 152 aa13.35□□□□□ -0.27
SDC2-205ENST00000520233 DNASE2O00115 360 aaPredicted RBP13.35□□□□□ -0.27
SDC2-205ENST00000520233 CXorf1O96002 111 aa13.35□□□□□ -0.27
SDC2-205ENST00000520233 PYYP10082 97 aa13.35□□□□□ -0.27
SDC2-205ENST00000520233 HIST1H1EP10412 219 aaKnown RBP13.35□□□□□ -0.27
SDC2-205ENST00000520233 EGFEM1PQ0D2K5 195 aa13.35□□□□□ -0.27
SDC2-205ENST00000520233 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.35□□□□□ -0.27
SDC2-205ENST00000520233 DCANP1Q8TF63 244 aa13.35□□□□□ -0.27
SDC2-205ENST00000520233 MBD3L1Q8WWY6 194 aa13.35□□□□□ -0.27
SDC2-205ENST00000520233 ZMAT5Q9UDW3 170 aaKnown RBP13.35□□□□□ -0.27
SDC2-205ENST00000520233 MAP1LC3B2A6NCE7 125 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 OR4C46A6NHA9 309 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 K7EQG2 157 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 H2AFB1P0C5Y9 115 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 ARL14EPLP0DKL9 152 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 TFPI2P48307 235 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 GUK1Q16774 197 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 SAMD13Q5VXD3 122 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 LCN15Q6UWW0 184 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 WFDC3Q8IUB2 231 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 ZNF680Q8NEM1 530 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 FXYD5Q96DB9 178 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 MAP1LC3BQ9GZQ8 125 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 ZNF586Q9NXT0 402 aa13.34□□□□□ -0.27
SDC2-205ENST00000520233 ZNF256Q9Y2P7 627 aaPredicted RBP13.34□□□□□ -0.27
SDC2-205ENST00000520233 IFNA7P01567 189 aa13.33□□□□□ -0.28
SDC2-205ENST00000520233 OR10J4P0C629 311 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms