RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 RAP2BP61225 183 aa11.28□□□□□ -0.6
VPS37A-204ENST00000519381 B2MP61769 119 aa11.28□□□□□ -0.6
VPS37A-204ENST00000519381 SPANXN5Q5MJ07 72 aa11.28□□□□□ -0.6
VPS37A-204ENST00000519381 S100A7AQ86SG5 101 aa11.28□□□□□ -0.6
VPS37A-204ENST00000519381 OR4D5Q8NGN0 318 aa11.28□□□□□ -0.6
VPS37A-204ENST00000519381 MCFD2Q8NI22 146 aa11.28□□□□□ -0.6
VPS37A-204ENST00000519381 C20orf173Q96LM9 149 aa11.28□□□□□ -0.6
VPS37A-204ENST00000519381 STRAPQ9Y3F4 350 aaKnown RBP11.28□□□□□ -0.6
VPS37A-204ENST00000519381 LYRM9A8MSI8 78 aa11.27□□□□□ -0.61
VPS37A-204ENST00000519381 M0R2Z0 102 aa11.27□□□□□ -0.61
VPS37A-204ENST00000519381 DEFB130BP0DP73 79 aa11.27□□□□□ -0.61
VPS37A-204ENST00000519381 DEFB130AP0DP74 79 aa11.27□□□□□ -0.61
VPS37A-204ENST00000519381 CNN1P51911 297 aaKnown RBP11.27□□□□□ -0.61
VPS37A-204ENST00000519381 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.61
VPS37A-204ENST00000519381 LRRC20Q8TCA0 184 aa11.27□□□□□ -0.61
VPS37A-204ENST00000519381 IGKV1OR2-108A0A075B7D4 117 aa11.26□□□□□ -0.61
VPS37A-204ENST00000519381 ZNF705GA8MUZ8 300 aaPredicted RBP11.26□□□□□ -0.61
VPS37A-204ENST00000519381 H3BP45 60 aa11.26□□□□□ -0.61
VPS37A-204ENST00000519381 PITX3O75364 302 aa11.26□□□□□ -0.61
VPS37A-204ENST00000519381 HOXB5P09067 269 aa11.26□□□□□ -0.61
VPS37A-204ENST00000519381 GATA2P23769 480 aaPredicted RBP11.26□□□□□ -0.61
VPS37A-204ENST00000519381 TNFSF8P32971 234 aa11.26□□□□□ -0.61
VPS37A-204ENST00000519381 FAM3BP58499 235 aaPredicted RBP11.26□□□□□ -0.61
VPS37A-204ENST00000519381 RHOBP62745 196 aa11.26□□□□□ -0.61
VPS37A-204ENST00000519381 ACOT7LQ6ZUV0 252 aa11.26□□□□□ -0.61
VPS37A-204ENST00000519381 SLC25A21Q9BQT8 299 aaPredicted RBP11.26□□□□□ -0.61
VPS37A-204ENST00000519381 F5H768 121 aa11.25□□□□□ -0.61
VPS37A-204ENST00000519381 NUDT3O95989 172 aa11.25□□□□□ -0.61
VPS37A-204ENST00000519381 IL5P05113 134 aa11.25□□□□□ -0.61
VPS37A-204ENST00000519381 OR5G3P0C626 314 aa11.25□□□□□ -0.61
VPS37A-204ENST00000519381 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
VPS37A-204ENST00000519381 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.25□□□□□ -0.61
VPS37A-204ENST00000519381 Q6ZR54 194 aa11.25□□□□□ -0.61
VPS37A-204ENST00000519381 LRTM2Q8N967 370 aa11.25□□□□□ -0.61
VPS37A-204ENST00000519381 OR11H7Q8NGC8 314 aa11.25□□□□□ -0.61
VPS37A-204ENST00000519381 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
VPS37A-204ENST00000519381 RYR1P21817 5038 aa11.24□□□□□ -0.61
VPS37A-204ENST00000519381 BOLA2-SMG1P6H3BVE0 249 aa11.24□□□□□ -0.61
VPS37A-204ENST00000519381 SFT2D2O95562 160 aa11.24□□□□□ -0.61
VPS37A-204ENST00000519381 S100A5P33763 92 aa11.24□□□□□ -0.61
VPS37A-204ENST00000519381 INPP1P49441 399 aa11.24□□□□□ -0.61
VPS37A-204ENST00000519381 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
VPS37A-204ENST00000519381 BAP18Q8IXM2 172 aa11.24□□□□□ -0.61
VPS37A-204ENST00000519381 RNF182Q8N6D2 247 aa11.24□□□□□ -0.61
VPS37A-204ENST00000519381 SLIRPQ9GZT3 109 aaKnown RBP11.24□□□□□ -0.61
VPS37A-204ENST00000519381 HYPMO75409 117 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 ATP5G1P05496 136 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 HTN1P15515 57 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 ATP5G3P48201 142 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 PPP1R1AQ13522 171 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 CLINT1Q14677 625 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 IGFL4Q6B9Z1 124 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 AMTNQ6UX39 209 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 CYP2G1PQ6ZSU1 146 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 TMEM256Q8N2U0 113 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 LINC01587Q99440 93 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 SLC25A39Q9BZJ4 359 aaPredicted RBP11.23□□□□□ -0.61
VPS37A-204ENST00000519381 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
VPS37A-204ENST00000519381 TRAV12-2A0A075B6T6 113 aa11.22□□□□□ -0.61
VPS37A-204ENST00000519381 A8MTW9 85 aa11.22□□□□□ -0.61
VPS37A-204ENST00000519381 H3BRN7 92 aa11.22□□□□□ -0.61
VPS37A-204ENST00000519381 LINC00869P0C866 280 aa11.22□□□□□ -0.61
VPS37A-204ENST00000519381 TMEM144Q7Z5S9 345 aa11.22□□□□□ -0.61
VPS37A-204ENST00000519381 ZNF575Q86XF7 245 aa11.22□□□□□ -0.61
VPS37A-204ENST00000519381 DEDD2Q8WXF8 326 aa11.22□□□□□ -0.61
VPS37A-204ENST00000519381 PSENENQ9NZ42 101 aa11.22□□□□□ -0.61
VPS37A-204ENST00000519381 MGAT4CQ9UBM8 478 aa11.22□□□□□ -0.61
VPS37A-204ENST00000519381 DNAH11Q96DT5 4516 aa11.21□□□□□ -0.61
VPS37A-204ENST00000519381 CCDC160A6NGH7 325 aa11.21□□□□□ -0.61
VPS37A-204ENST00000519381 H3BMQ9 156 aa11.21□□□□□ -0.61
VPS37A-204ENST00000519381 ANXA7P20073 488 aaKnown RBP11.21□□□□□ -0.61
VPS37A-204ENST00000519381 TSPOP30536 169 aa11.21□□□□□ -0.61
VPS37A-204ENST00000519381 CCL18P55774 89 aa11.21□□□□□ -0.61
VPS37A-204ENST00000519381 SELENOTP62341 195 aa11.21□□□□□ -0.61
VPS37A-204ENST00000519381 TRIM63Q969Q1 353 aa11.21□□□□□ -0.61
VPS37A-204ENST00000519381 SOSTQ9BQB4 213 aa11.21□□□□□ -0.61
VPS37A-204ENST00000519381 SHANK2-AS3Q9BTD1 123 aa11.21□□□□□ -0.61
VPS37A-204ENST00000519381 NACAE9PAV3 2078 aa11.21□□□□□ -0.62
VPS37A-204ENST00000519381 DYNC1H1Q14204 4646 aaKnown RBP11.21□□□□□ -0.62
VPS37A-204ENST00000519381 MUC4Q99102 2169 aa11.2□□□□□ -0.62
VPS37A-204ENST00000519381 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
VPS37A-204ENST00000519381 PRSS46E5RG02 174 aa11.2□□□□□ -0.62
VPS37A-204ENST00000519381 SSSCA1O60232 199 aa11.2□□□□□ -0.62
VPS37A-204ENST00000519381 UBE2MP61081 183 aaKnown RBP11.2□□□□□ -0.62
VPS37A-204ENST00000519381 RRAS2P62070 204 aaPredicted RBP11.2□□□□□ -0.62
VPS37A-204ENST00000519381 OR8A1Q8NGG7 326 aa11.2□□□□□ -0.62
VPS37A-204ENST00000519381 C16orf74Q96GX8 76 aa11.2□□□□□ -0.62
VPS37A-204ENST00000519381 PKD1P98161 4303 aa11.19□□□□□ -0.62
VPS37A-204ENST00000519381 TRAV8-2A0A0B4J237 113 aa11.19□□□□□ -0.62
VPS37A-204ENST00000519381 CRXO43186 299 aaPredicted RBP11.19□□□□□ -0.62
VPS37A-204ENST00000519381 SCGB1D2O95969 90 aa11.19□□□□□ -0.62
VPS37A-204ENST00000519381 POLR2GP62487 172 aaKnown RBP eCLIP11.19□□□□□ -0.62
VPS37A-204ENST00000519381 TMEM182Q6ZP80 229 aaPredicted RBP11.19□□□□□ -0.62
VPS37A-204ENST00000519381 C6orf223Q8N319 242 aa11.19□□□□□ -0.62
VPS37A-204ENST00000519381 UHRF2Q96PU4 802 aa11.19□□□□□ -0.62
VPS37A-204ENST00000519381 ARL6Q9H0F7 186 aa11.19□□□□□ -0.62
VPS37A-204ENST00000519381 TIMM8BQ9Y5J9 83 aaPredicted RBP11.19□□□□□ -0.62
VPS37A-204ENST00000519381 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
VPS37A-204ENST00000519381 CBY3A6NI87 242 aa11.18□□□□□ -0.62
VPS37A-204ENST00000519381 ADAP1O75689 374 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms