RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 TMEM37Q8WXS4 190 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 GGACTQ9BVM4 153 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 ARV1Q9H2C2 271 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 SEPSECSQ9HD40 501 aaKnown RBP9.67□□□□□ -0.86
VEGFA-219ENST00000518824 PFDN2Q9UHV9 154 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 HLA-DRB4X5D2U9 266 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 LYSTQ99698 3801 aa9.67□□□□□ -0.86
VEGFA-219ENST00000518824 UBE2L5PA0A1B0GUS4 154 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 MRPS12O15235 138 aaKnown RBP9.66□□□□□ -0.86
VEGFA-219ENST00000518824 RBMY1A1P0DJD3 496 aaKnown RBP9.66□□□□□ -0.86
VEGFA-219ENST00000518824 RBMY1CP0DJD4 496 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 SPP1P10451 314 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 PVALBP20472 110 aaPredicted RBP9.66□□□□□ -0.86
VEGFA-219ENST00000518824 GALR1P47211 349 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 PSMB3P49720 205 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 SULT1A1P50225 295 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 RAP2BP61225 183 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 SELENOTP62341 195 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 FGL1Q08830 312 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 RBMY1FQ15415 496 aaKnown RBP9.66□□□□□ -0.86
VEGFA-219ENST00000518824 VWC2Q2TAL6 325 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 RNF182Q8N6D2 247 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 SAV1Q9H4B6 383 aaPredicted RBP9.66□□□□□ -0.86
VEGFA-219ENST00000518824 XCL2Q9UBD3 114 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 WDR83OSQ9Y284 106 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 X6R8D5 127 aa9.66□□□□□ -0.86
VEGFA-219ENST00000518824 ZNF705DP0CH99 300 aaPredicted RBP9.65□□□□□ -0.86
VEGFA-219ENST00000518824 ZNF705BP0CI00 300 aaPredicted RBP9.65□□□□□ -0.86
VEGFA-219ENST00000518824 ID1P41134 155 aa9.65□□□□□ -0.86
VEGFA-219ENST00000518824 CAMLGP49069 296 aa9.65□□□□□ -0.86
VEGFA-219ENST00000518824 MORN3Q6PF18 240 aaPredicted RBP9.65□□□□□ -0.86
VEGFA-219ENST00000518824 ZNF546Q86UE3 836 aa9.65□□□□□ -0.86
VEGFA-219ENST00000518824 Q8NAQ8 132 aa9.65□□□□□ -0.86
VEGFA-219ENST00000518824 C16orf92Q96LL3 132 aa9.65□□□□□ -0.86
VEGFA-219ENST00000518824 RNF126Q9BV68 326 aa9.65□□□□□ -0.86
VEGFA-219ENST00000518824 NMES1Q9C002 83 aa9.65□□□□□ -0.86
VEGFA-219ENST00000518824 SLC35B3Q9H1N7 401 aa9.65□□□□□ -0.86
VEGFA-219ENST00000518824 UQCC1Q9NVA1 299 aa9.65□□□□□ -0.86
VEGFA-219ENST00000518824 RYR3Q15413 4870 aa9.65□□□□□ -0.86
VEGFA-219ENST00000518824 TRAV5A0A0B4J249 113 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 IGHV4-28A0A0C4DH34 117 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 H3BTX0 84 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 ISLRO14498 428 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 NANOS2P60321 138 aaKnown RBP9.64□□□□□ -0.87
VEGFA-219ENST00000518824 PRR20EP86478 221 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 PRR20CP86479 221 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 PRR20DP86480 221 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 PRR20BP86481 221 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 PRR20AP86496 221 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 FOXI2Q6ZQN5 318 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 LINC00305Q7Z4B0 112 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 ZNF709Q8N972 641 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 OR4B1Q8NGF8 309 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 ALG5Q9Y673 324 aa9.64□□□□□ -0.87
VEGFA-219ENST00000518824 A0A0J9YX75 114 aa9.63□□□□□ -0.87
VEGFA-219ENST00000518824 LCE6AA0A183 80 aa9.63□□□□□ -0.87
VEGFA-219ENST00000518824 CXorf65A6NEN9 183 aa9.63□□□□□ -0.87
VEGFA-219ENST00000518824 ZNF705EA8MWA4 302 aaPredicted RBP9.63□□□□□ -0.87
VEGFA-219ENST00000518824 SSNA1O43805 119 aa9.63□□□□□ -0.87
VEGFA-219ENST00000518824 S100A11P31949 105 aa9.63□□□□□ -0.87
VEGFA-219ENST00000518824 BAXQ07812 192 aa9.63□□□□□ -0.87
VEGFA-219ENST00000518824 OPCMLQ14982 345 aa9.63□□□□□ -0.87
VEGFA-219ENST00000518824 FAM78BQ5VT40 261 aa9.63□□□□□ -0.87
VEGFA-219ENST00000518824 PPP1R1CQ8WVI7 109 aa9.63□□□□□ -0.87
VEGFA-219ENST00000518824 SACSQ9NZJ4 4579 aa9.63□□□□□ -0.87
VEGFA-219ENST00000518824 ELOA3CA0A087WX78 387 aaPredicted RBP9.62□□□□□ -0.87
VEGFA-219ENST00000518824 COX7A2P2O60397 106 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 RPL7P18124 248 aaKnown RBP9.62□□□□□ -0.87
VEGFA-219ENST00000518824 ATF4P18848 351 aaPredicted RBP9.62□□□□□ -0.87
VEGFA-219ENST00000518824 CXCL3P19876 107 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 FGF7P21781 194 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 MEOX2P50222 304 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 CLINT1Q14677 625 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 GCSAMLQ5JQS6 135 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 AMTNQ6UX39 209 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 STX12Q86Y82 276 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 OR5C1Q8NGR4 320 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 THAP6Q8TBB0 222 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 GPR82Q96P67 336 aa9.62□□□□□ -0.87
VEGFA-219ENST00000518824 C11orf68Q9H3H3 251 aaKnown RBP9.62□□□□□ -0.87
VEGFA-219ENST00000518824 A0A087X0K7 114 aa9.61□□□□□ -0.87
VEGFA-219ENST00000518824 E5RGE8 158 aa9.61□□□□□ -0.87
VEGFA-219ENST00000518824 H3BQ15 152 aa9.61□□□□□ -0.87
VEGFA-219ENST00000518824 SLC17A3O00476 420 aa9.61□□□□□ -0.87
VEGFA-219ENST00000518824 MPC2O95563 127 aa9.61□□□□□ -0.87
VEGFA-219ENST00000518824 C10orf113Q5VZT2 155 aa9.61□□□□□ -0.87
VEGFA-219ENST00000518824 RPRMQ9NS64 109 aa9.61□□□□□ -0.87
VEGFA-219ENST00000518824 SLC39A9Q9NUM3 307 aa9.61□□□□□ -0.87
VEGFA-219ENST00000518824 PXMP4Q9Y6I8 212 aa9.61□□□□□ -0.87
VEGFA-219ENST00000518824 A8MTW9 85 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 RLN2P04090 185 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 RPL29P47914 159 aaKnown RBP9.6□□□□□ -0.87
VEGFA-219ENST00000518824 B2MP61769 119 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 HBG1P69891 147 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 HBG2P69892 147 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 ATP6V1FQ16864 119 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 TMEM41BQ5BJD5 291 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 PXDC1Q5TGL8 231 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 SPATA31B1PQ5VZV4 182 aa9.6□□□□□ -0.87
VEGFA-219ENST00000518824 EBLN2Q6P2I7 272 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms