RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 CRYBB3P26998 211 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 P2RY1P47900 373 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 ATP5G3P48201 142 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 WNT4P56705 351 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 DHRS2Q13268 280 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 EIF4EBP1Q13541 118 aaPredicted RBP4.2□□□□□ -1.74
CCDC6-203ENST00000518638 ACSM3Q53FZ2 586 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 SPATA31B1PQ5VZV4 182 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 TPRA1Q86W33 373 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 ZFP41Q8N8Y5 198 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 OR4D10Q8NGI6 311 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 OR6F1Q8NGZ6 308 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 SLC25A46Q96AG3 418 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 TMEM80Q96HE8 168 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 TSC22D3Q99576 134 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 LITAFQ99732 161 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 C7orf50Q9BRJ6 194 aaKnown RBP4.2□□□□□ -1.74
CCDC6-203ENST00000518638 TMEM70Q9BUB7 260 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 NDUFA4L2Q9NRX3 87 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 PRNDQ9UKY0 176 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 RAB22AQ9UL26 194 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 HLA-DRB4X5D2U9 266 aa4.2□□□□□ -1.74
CCDC6-203ENST00000518638 IGHV3-66A0A0C4DH42 116 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 TEX50A0A1B0GTY4 177 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 LOC100130705A0A1B0GUX0 176 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 FAM74A7A6NL05 159 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 F5H768 121 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 I3L2K1 104 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 CORTO00230 105 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 MFNGO00587 321 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 GSTZ1O43708 216 aaPredicted RBP4.19□□□□□ -1.74
CCDC6-203ENST00000518638 ARL6IP5O75915 188 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 OXTP01178 125 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 SMR3BP02814 79 aaPredicted RBP4.19□□□□□ -1.74
CCDC6-203ENST00000518638 NFYAP23511 347 aaPredicted RBP4.19□□□□□ -1.74
CCDC6-203ENST00000518638 UCP1P25874 307 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 B2MP61769 119 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 FAM74A3Q4VXF1 159 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 CNIH2Q6PI25 160 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 IQCF2Q8IXL9 164 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 ZNF485Q8NCK3 441 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 OR4C5Q8NGB2 326 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 OR4C16Q8NGL9 310 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 OR10R2Q8NGX6 335 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 HINT2Q9BX68 163 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 Q9HAA7 133 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 CSDC2Q9Y534 153 aaKnown RBP4.19□□□□□ -1.74
CCDC6-203ENST00000518638 OR51B2Q9Y5P1 312 aa4.19□□□□□ -1.74
CCDC6-203ENST00000518638 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 J3QRK9 145 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 MT-CO2P00403 227 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 UCHL1P09936 223 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 NUP62P37198 522 aaPredicted RBP4.18□□□□□ -1.74
CCDC6-203ENST00000518638 LINC00315P59091 139 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 KIAA1644Q3SXP7 199 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 C1orf146Q5VVC0 180 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 SAMD13Q5VXD3 122 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 RNASEKQ6P5S7 137 aaKnown RBP4.18□□□□□ -1.74
CCDC6-203ENST00000518638 KCNIP4Q6PIL6 250 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 H2BFWTQ7Z2G1 175 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 ZNF555Q8NEP9 628 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 OR10G8Q8NGN5 311 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 APH1BQ8WW43 257 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 MAFIPQ8WZ33 124 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 FAM3DQ96BQ1 224 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 CCDC90BQ9GZT6 254 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 GEMIN7Q9H840 131 aaKnown RBP4.18□□□□□ -1.74
CCDC6-203ENST00000518638 ZNF446Q9NWS9 450 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 CLEC2DQ9UHP7 191 aa4.18□□□□□ -1.74
CCDC6-203ENST00000518638 MRPS16Q9Y3D3 137 aaKnown RBP4.18□□□□□ -1.74
CCDC6-203ENST00000518638 TRAV30A0A087WSZ9 112 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 TRAV3A0A0B4J244 114 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 IGKV1D-13A0A0B4J2D9 117 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 TNFSF12O43508 249 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 ADAP1O75689 374 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 IGKV1-13P0DP09 117 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 TSPOP30536 169 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 ID1P41134 155 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 KRTAP10-12P60413 245 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 GNGT1P63211 74 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 ERHP84090 104 aaKnown RBP4.17□□□□□ -1.74
CCDC6-203ENST00000518638 TRAM1Q15629 374 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 TMEM69Q5SWH9 247 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 FOXI2Q6ZQN5 318 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 OR13F1Q8NGS4 319 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 OR10J6PQ8NGY7 276 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 TMEM230Q96A57 120 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 TMEM208Q9BTX3 173 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 C9orf16Q9BUW7 83 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 ZNF586Q9NXT0 402 aa4.17□□□□□ -1.74
CCDC6-203ENST00000518638 FAT1Q14517 4588 aa4.16□□□□□ -1.74
CCDC6-203ENST00000518638 A0A1B0GU03 582 aa4.16□□□□□ -1.74
CCDC6-203ENST00000518638 H3BNG1 76 aa4.16□□□□□ -1.74
CCDC6-203ENST00000518638 K7EP13 123 aa4.16□□□□□ -1.74
CCDC6-203ENST00000518638 SULT1C2O00338 296 aa4.16□□□□□ -1.74
CCDC6-203ENST00000518638 DEFB130BP0DP73 79 aa4.16□□□□□ -1.74
CCDC6-203ENST00000518638 DEFB130AP0DP74 79 aa4.16□□□□□ -1.74
CCDC6-203ENST00000518638 PSMA1P25786 263 aaKnown RBP4.16□□□□□ -1.74
CCDC6-203ENST00000518638 SUB1P53999 127 aaKnown RBP eCLIP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms