RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TMEM52BQ4KMG9 183 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF793Q6ZN11 406 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF818PQ6ZRF7 136 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 SLC25A48Q6ZT89 311 aaKnown RBP3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 LINC00596Q86U02 117 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 ARL17AQ8IVW1 177 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 RNF152Q8N8N0 203 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 NT5CQ8TCD5 201 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 NPIPB3Q92617 1050 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 URB1-AS1Q96HZ7 61 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 RITA1Q96K30 269 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 SLC25A39Q9BZJ4 359 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 RNASE7Q9H1E1 156 aaKnown RBP3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 AAMDCQ9H7C9 122 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF442Q9H7R0 627 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF492Q9P255 531 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 EPDR1Q9UM22 224 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 TCF19Q9Y242 345 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 FOXA2Q9Y261 457 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 TP53TG1Q9Y2A0 90 aa3.84□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRGV11A0A075B6L2 103 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 IGHV3OR15-7A0A075B7D8 119 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 NPIPB11E5RHQ5 1161 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 H3BVH4 76 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 TIMM23O14925 209 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 SLC25A20O43772 301 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 IGKCP01834 107 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 PYYP10082 97 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 GP1BBP13224 206 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 CTLA4P16410 223 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 EMDP50402 254 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 FOXA3P55318 350 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 EDDM3BP56851 147 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 ATXN8Q156A1 80 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 TXNDC8Q6A555 127 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 LINC00643Q86TS7 51 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 ABHD12Q8N2K0 398 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 DRAM1Q8N682 238 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 OR8A1Q8NGG7 326 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 TRGV9Q99603 122 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 SPRY4Q9C004 299 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 AICDAQ9GZX7 198 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 RPP21Q9H633 154 aaKnown RBP3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 FGF22Q9HCT0 170 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 TMEM74BQ9NUR3 256 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 OCIAD1Q9NX40 245 aa3.83□□□□□ -1.8
HMGB1P19-201ENST00000517578 ATG2BQ96BY7 2078 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 TMED7-TICAM2A0A0A6YYA0 188 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 SH2D7A6NKC9 451 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 PMS2P5A8MQ11 134 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 LGALS9O00182 355 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 KLK10O43240 276 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 P01737 135 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 CD7P09564 240 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 COX6A1P12074 109 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 CRYGSP22914 178 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 PLNP26678 52 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 RPS27P42677 84 aaKnown RBP3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 LOXL3P58215 753 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 CACNG7P62955 275 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 CCL8P80075 99 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 FXYD3Q14802 87 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 PLPP4Q5VZY2 271 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 LINC00173Q6ZV60 143 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 FGFRL1Q8N441 504 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 LINC00476Q8WZB0 136 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 BORCS8Q96FH0 119 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 IGF2BP2-AS1Q96M15 143 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 C9orf85Q96MD7 179 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 HDHD3Q9BSH5 251 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 CHCHD5Q9BSY4 110 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 AGPAT4-IT1Q9H0P7 198 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 DYNLRB1Q9NP97 96 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 CCL28Q9NRJ3 127 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 ZNF355PQ9NSJ1 428 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 LSM7Q9UK45 103 aaKnown RBP3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 KLF13Q9Y2Y9 288 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 F11RQ9Y624 299 aaKnown RBP3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 SELENOKQ9Y6D0 94 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 ARID1AO14497 2285 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 HCFC1P51610 2035 aa3.82□□□□□ -1.8
HMGB1P19-201ENST00000517578 COL16A1Q07092 1604 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 TRAV12-2A0A075B6T6 113 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 IGKV1-9A0A0C4DH69 117 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 A0A0U1RRA0 63 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 A0A1B0GUT8 65 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 TMEM202A6NGA9 273 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 LINC01549A6NIU2 74 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 ZNF785A8K8V0 405 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 A8MZ25 164 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 OOSP1A8MZH6 123 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 H3BMM0 161 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 H3BT86 120 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 K7EQS6 105 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 K7ERJ3 54 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 CLDN14O95500 239 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 IGLV2-8P01709 118 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 COX6CP09669 75 aa3.81□□□□□ -1.8
HMGB1P19-201ENST00000517578 FRMD6-AS1P0C7T7 363 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms