RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 WDR73Q6P4I2 378 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 MRPL41Q8IXM3 137 aaKnown RBP2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 PIP4P2Q8N4L2 257 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 ZNF491Q8N8L2 437 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 Q8N9W7 124 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 TMEM75Q8N9X5 138 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 OR8B3Q8NGG8 313 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 OR1B1Q8NGR6 318 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 TSKUQ8WUA8 353 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 TMEM190Q8WZ59 177 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 MISP3Q96FF7 219 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 GRAMD2BQ96HH9 432 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 CCDC140Q96MF4 163 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 OR8B2Q96RD0 313 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 TBX15Q96SF7 602 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 RNF5Q99942 180 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 HSPB9Q9BQS6 159 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 ALKBH7Q9BT30 221 aaPredicted RBP2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 RPP21Q9H633 154 aaKnown RBP2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 NGBQ9NPG2 151 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 OTORQ9NRC9 128 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 C1RLQ9NZP8 487 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 ZMAT5Q9UDW3 170 aaKnown RBP2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 TP73-AS1Q9UF72 201 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 EPDR1Q9UM22 224 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 TBL2Q9Y4P3 447 aaKnown RBP2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 CSPG4Q6UVK1 2322 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 DOPEY2Q9Y3R5 2298 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 CENPEQ02224 2701 aa2.54□□□□□ -2
SCARNA20.6-201ENST00000517251 LRRK2Q5S007 2527 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 APCP25054 2843 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 ITPR3Q14573 2671 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 A0A087X0K7 114 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 IGHV1-24A0A0C4DH33 117 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 IGHV2-70DA0A0C4DH43 119 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 CLPSL1A2RUU4 121 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 FAM231BA6NCW3 169 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 SH2D7A6NKC9 451 aaPredicted RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 ZNF705GA8MUZ8 300 aaPredicted RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 C19orf84I3L1E1 186 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 M0QZ24 198 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 M0R3E3 92 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 NDUFS7O75251 213 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 HYPMO75409 117 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 SLC25A5P05141 298 aaKnown RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 NBEAP1P0C6P0 100 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 RNF224P0DH78 156 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 HIST1H1EP10412 219 aaKnown RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 MGST1P10620 155 aaKnown RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 ZFP36P26651 326 aaKnown RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 HTR1DP28221 377 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 BRS3P32247 399 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 CRIP1P50238 77 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 UCNP55089 124 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 TPPP2P59282 170 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 LYZP61626 148 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 LMO4P61968 165 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 NUTF2P61970 127 aaKnown RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 RANP62826 216 aaKnown RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 PAFAH1B2P68402 229 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 HBBP68871 147 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 RPL19P84098 196 aaKnown RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 PAX8Q06710 450 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 KLRB1Q12918 225 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 PDE6HQ13956 83 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 LBHQ53QV2 105 aaPredicted RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 MINOS1Q5TGZ0 78 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 ETFRF1Q6IPR1 90 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 EBLN2Q6P2I7 272 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 TOMM20LQ6UXN7 152 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 LINC00173Q6ZV60 143 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 GOLT1AQ6ZVE7 132 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 VMO1Q7Z5L0 202 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 EXOC3-AS1Q8N2X6 119 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 CIARTQ8N365 385 aaPredicted RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 STXBP6Q8NFX7 210 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 OR4B1Q8NGF8 309 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 VN1R17PQ8TDU5 208 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 ITLN2Q8WWU7 325 aaPredicted RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 ARPC1AQ92747 370 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 RPEQ96AT9 228 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 RNF125Q96EQ8 232 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 SGK494Q96LW2 274 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 GPR82Q96P67 336 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 MS4A10Q96PG2 267 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 RBM14Q96PK6 669 aaKnown RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 FAM103A1Q9BTL3 118 aaKnown RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 SSBP4Q9BWG4 385 aaPredicted RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 CNFNQ9BYD5 112 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 GFRA4Q9GZZ7 299 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 PRORYQ9H606 182 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 NRN1Q9NPD7 142 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 DPM3Q9P2X0 92 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 ONECUT1Q9UBC0 465 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 NAT8BQ9UHF3 227 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 HIGD1AQ9Y241 93 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 SOX21Q9Y651 276 aaPredicted RBP2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 MINOS1-NBL1R4GNA1 71 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 ACACBO00763 2458 aa2.53□□□□□ -2
SCARNA20.6-201ENST00000517251 CREBBPQ92793 2442 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms