RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 CBX3Q13185 183 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 KRR1Q13601 381 aaKnown RBP-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 TAF1AQ15573 450 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 AKIRIN2Q53H80 203 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HACD4Q5VWC8 232 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 LPCAT3Q6P1A2 487 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 RPL22L1Q6P5R6 122 aaKnown RBP-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 PID1Q7Z2X4 250 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 S100A7AQ86SG5 101 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CCDC170Q8IYT3 715 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 RIBC1Q8N443 379 aaPredicted RBP-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 TEX29Q8N6K0 151 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ROPN1LQ96C74 230 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CABS1Q96KC9 395 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 AP1S3Q96PC3 154 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SPXQ9BT56 116 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 TMEM109Q9BVC6 243 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 DERL2Q9GZP9 239 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 OR51I1Q9H343 314 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 OSTCQ9NRP0 149 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SCP2D1Q9UJQ7 156 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SNX6Q9UNH7 406 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 KIF3AQ9Y496 699 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ERCC6L2Q5T890 1561 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 MAP3K1Q13233 1512 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 NISCHQ9Y2I1 1504 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 WNK3Q9BYP7 1800 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SCN8AQ9UQD0 1980 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CENPEQ02224 2701 aa-2.12□□□□□ -2.75
RNU6-1238P-201ENST00000517215 DLEC1Q9Y238 1755 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 GAPVD1Q14C86 1478 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ZNF609O15014 1411 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 TRAV8-7A0A075B6U6 113 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 A0A087WVE0 104 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SMCO3A2RU48 225 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 FAM159BA6NKW6 160 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ARL6IP5O75915 188 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 GUCA1CO95843 209 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CCKP06307 115 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST1H1TP22492 207 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST1H2BOP23527 126 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 STOMP27105 288 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST1H2BBP33778 126 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 MARCKSL1P49006 195 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST1H2BDP58876 126 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST1H2BCP62807 126 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 FABP5Q01469 135 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 NEDD8Q15843 81 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST2H2BEQ16778 126 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CAVIN4Q5BKX8 364 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST2H2BFQ5QNW6 126 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 TTC33Q6PID6 262 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 RUFY3Q7L099 469 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 FAM122BQ7Z309 247 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SPERTQ8NA61 448 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 OR4K15Q8NH41 348 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST1H2BHQ93079 126 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SLAMF6Q96DU3 332 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CATSPER2Q96P56 530 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST1H2BNQ99877 126 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HIST1H2BMQ99879 126 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 TPPP3Q9BW30 176 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 OR2H1Q9GZK4 316 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 METTL8Q9H825 291 aaKnown RBP-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 SCN3BQ9NY72 215 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ERGIC3Q9Y282 383 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 LRP6O75581 1613 aa-2.13□□□□□ -2.75
RNU6-1238P-201ENST00000517215 MAGI1Q96QZ7 1491 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 IGHV1-69-2A0A0G2JMI3 117 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 RNF103-CHMP3A0A140T963 221 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CPSF4LA6NMK7 179 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ZNF670-ZNF695F2Z2N8 137 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HMMRO75330 724 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CNIH1O95406 144 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 FADS2O95864 444 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 MT1FP04733 61 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HMGB1P09429 215 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 COX8AP10176 69 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 KCNE1P15382 129 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 PHBP35232 272 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 DEKP35659 375 aaKnown RBP-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 BEX3Q00994 111 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 DNAJC3Q13217 504 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 PIP5KL1Q5T9C9 394 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CFAP126Q5VTH2 177 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 RESP18Q5W5W9 173 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 TRAPPC6BQ86SZ2 158 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CMTM8Q8IZV2 173 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ARHGAP18Q8N392 663 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ZNF321PQ8N8H1 164 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 BHLHE23Q8NDY6 225 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 OR2AE1Q8NHA4 323 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 FAM45AQ8TCE6 357 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 DMAC1Q96GE9 116 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 ARL5BQ96KC2 179 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 MYCBPQ99417 103 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 CENPKQ9BS16 269 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 PRADC1Q9BSG0 188 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 MAP1LC3CQ9BXW4 147 aa-2.14□□□□□ -2.75
RNU6-1238P-201ENST00000517215 HDHD2Q9H0R4 259 aa-2.14□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms