RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 PAEPP09466 180 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 METTL15P1P0C7V9 234 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 TRGC1P0CF51 173 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 EVI2AP22794 236 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 KRTAP5-9P26371 169 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 ZNF90Q03938 601 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 NDUFA5Q16718 116 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 Q6ZQT0 140 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 LRRC28Q86X40 367 aaPredicted RBP1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 WFDC11Q8NEX6 87 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 TSTD1Q8NFU3 115 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 MRPS24Q96EL2 167 aaKnown RBP1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 ZNF714Q96N38 554 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 LINC00167Q96N53 147 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 CBLN4Q9NTU7 201 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 OR5AC2Q9NZP5 309 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 TCOF1Q13428 1488 aaKnown RBP1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 FRMPD1Q5SYB0 1578 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 USP54Q70EL1 1684 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 MYOFQ9NZM1 2061 aa1.41□□□□□ -2.18
SCARNA3-201ENST00000517097 NISCHQ9Y2I1 1504 aa1.4□□□□□ -2.18
SCARNA3-201ENST00000517097 SMARCA4P51532 1647 aa1.4□□□□□ -2.18
SCARNA3-201ENST00000517097 FREM1Q5H8C1 2179 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 MGAMO43451 1857 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 IGKV1D-42A0A075B6H8 117 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 IGLV10-54A0A075B6I4 117 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 TRAV13-1A0A0B4J241 112 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 MUC21A0A0G2JKD1 596 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 MUC21A0A140T8X8 626 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 A0A1B0GV90 55 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 CCDC160A6NGH7 325 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 H3BMG7 143 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 RER1O15258 196 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 TIMM17BO60830 172 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 SULT1C4O75897 302 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 MT-ND4LP03901 98 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 IGKV3-11P04433 115 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 IFNA4P05014 189 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 CTSDP07339 412 aaPredicted RBP1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 DNAJB13P59910 316 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 TMEM258P61165 79 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 IGFBP7Q16270 282 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 NNATQ16517 81 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 TAF9Q16594 264 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 ZNF791Q3KP31 576 aaPredicted RBP1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 PRR9Q5T870 116 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 IGFL1Q6UW32 110 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 TMEM14EPQ6UXP3 125 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 PATE2Q6UY27 113 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 C7orf65Q6ZTY9 151 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 AAED1Q7RTV5 226 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 DEFB128Q7Z7B8 93 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 OR5D16Q8NGK9 328 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 BRK1Q8WUW1 75 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 PKMYT1Q99640 499 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 CGREF1Q99674 301 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 Q9BRP9 147 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 TAF9BQ9HBM6 251 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 BCL2L10Q9HD36 194 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 NDUFB11Q9NX14 153 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 PSORS1C2Q9UIG4 136 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 AKAP11Q9UKA4 1901 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 KIAA1549LQ6ZVL6 1849 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 ARHGEF11O15085 1522 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 DLC1Q96QB1 1528 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 OVOS2A0A0J9YW53 1432 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 OVOS2Q6IE36 1432 aa1.4□□□□□ -2.19
SCARNA3-201ENST00000517097 GLI3P10071 1580 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 PTPRDP23468 1912 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 RTL9Q8NET4 1388 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 ALPK3Q96L96 1907 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 TMSB15BA0A087X1C1 80 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 TRAV3A0A0B4J244 114 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 TRBV27A0A0K0K1C4 114 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 A0A1W2PNN7 141 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 HMSDA8MTL9 139 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 A8MWV9 139 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 LINC00587B1AMM8 73 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 M0R2Z0 102 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 IGLV6-57P01721 117 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 MT-ND6P03923 174 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 ZNF705BP0CI00 300 aaPredicted RBP1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 CRYGSP22914 178 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 RPL22P35268 128 aaKnown RBP1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 HINT1P49773 126 aaPredicted RBP1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 RAB5CP51148 216 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 AQP4P55087 323 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 ERHP84090 104 aaKnown RBP1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 GLYATL3Q5SZD4 288 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 TMEM244Q5VVB8 128 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 OR5H6Q8NGV6 325 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 OR4K15Q8NH41 348 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 ZNF418Q8TF45 676 aaPredicted RBP1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 NAT14Q8WUY8 206 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 AP1S3Q96PC3 154 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 NIT2Q9NQR4 276 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 NHP2Q9NX24 153 aaKnown RBP1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 CCL26Q9Y258 94 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 COL4A2P08572 1712 aa1.39□□□□□ -2.19
SCARNA3-201ENST00000517097 COL24A1Q17RW2 1714 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms