RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TRBV6-4A0A1B0GX49 114 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 CCL16O15467 120 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 CRHP06850 196 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 EIF5AL1Q6IS14 154 aaKnown RBP0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 C4orf22Q6V702 233 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 ZGRF1Q86YA3 2104 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 CANT1Q8WVQ1 401 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 STOML2Q9UJZ1 356 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 PRNDQ9UKY0 176 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 PIK3C2AO00443 1686 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 UHRF1BP1Q6BDS2 1440 aa0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 ZFC3H1O60293 1989 aaKnown RBP0.96□□□□□ -2.26
HMGCS1-207ENST00000514610 ADGBQ8N7X0 1667 aa0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 CCL25O15444 150 aa0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 INSL3P51460 131 aa0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 RPL19P84098 196 aaKnown RBP0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 C2orf82Q6UX34 121 aa0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 ZHX1-C8orf76Q96EF9 292 aa0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 PAIP2Q9BPZ3 127 aaKnown RBP0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 GINS3Q9BRX5 216 aa0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 GGACTQ9BVM4 153 aa0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 OR2J1Q9GZK6 312 aa0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 LY96Q9Y6Y9 160 aa0.95□□□□□ -2.26
HMGCS1-207ENST00000514610 NCAPD3P42695 1498 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 TRPM1Q7Z4N2 1603 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 TRAV10A0A0B4J240 114 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 H7C1C5 153 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 CXCL1P09341 107 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 HLA-EP13747 358 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 PHBP35232 272 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 LCN6P62502 163 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 IFT20Q8IY31 132 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 POP5Q969H6 163 aaKnown RBP0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 LINC00052Q96N35 136 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 TP53RKQ96S44 253 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 ORMDL1Q9P0S3 153 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 KDM6AO15550 1401 aaPredicted RBP0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 FREM3P0C091 2139 aa0.94□□□□□ -2.26
HMGCS1-207ENST00000514610 PTPRDP23468 1912 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 MED12Q93074 2177 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 CD109Q6YHK3 1445 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 DUXBA0A1W2PPF3 345 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 ODAMA1E959 279 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 K7ERJ3 54 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 M0R233 179 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 IFNA1P01562 189 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 C1orf134Q5TEV5 83 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 PATE2Q6UY27 113 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 ZNF833PQ6ZTB9 187 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 OR13C6PQ8NH95 151 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 Q8TAT8 98 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 AP3S1Q92572 193 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 AMELYQ99218 206 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 PBDC1Q9BVG4 233 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 LYRM2Q9NU23 88 aaPredicted RBP0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 SSR3Q9UNL2 185 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 CITO14578 2027 aa0.93□□□□□ -2.26
HMGCS1-207ENST00000514610 COL1A1P02452 1464 aaPredicted RBP0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 CAMSAP2Q08AD1 1489 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 NUP210Q8TEM1 1887 aaPredicted RBP0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 TET1Q8NFU7 2136 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 RIIAD1A6NNX1 92 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 AIPO00170 330 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 KLF7O75840 302 aaPredicted RBP0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 TRGC2P03986 189 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 TMBIM6P55061 237 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 ARPP19P56211 112 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 DSCR4P56555 118 aaPredicted RBP0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 GNG3P63215 75 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 AKR1C8PQ5T2L2 129 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 LINC00322Q6ZN03 302 aaPredicted RBP0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 SMIM20Q8N5G0 67 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 OR5D16Q8NGK9 328 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 OR4K15Q8NH41 348 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 RAB37Q96AX2 223 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 TEX37Q96LM6 180 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 ZNF714Q96N38 554 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 LYSMD1Q96S90 227 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 POPDC3Q9HBV1 291 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 CECR2Q9BXF3 1484 aa0.92□□□□□ -2.26
HMGCS1-207ENST00000514610 IGHV1-58A0A0C4DH39 117 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 E7EUB6 86 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 NCR3O14931 201 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 ERC2-IT1O76042 136 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 IGLV1-51P01701 117 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 PPP1R2P41236 205 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 TAS2R41P59536 307 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 CDK6Q00534 326 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 PSG9Q00887 426 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 MSMO1Q15800 293 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 SCGB2B2Q4G0G5 96 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 PPP1R2P3Q6NXS1 205 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 TMED4Q7Z7H5 227 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 PPTC7Q8NI37 304 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 MUCL1Q96DR8 90 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 GPX7Q96SL4 187 aaPredicted RBP0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 HOPXQ9BPY8 73 aaPredicted RBP0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 TMEM14CQ9P0S9 112 aa0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 EIF3AQ14152 1382 aaKnown RBP0.91□□□□□ -2.26
HMGCS1-207ENST00000514610 ZDBF2Q9HCK1 2354 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms