RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 BAMBIQ13145 260 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 DHRS2Q13268 280 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 PPP1R1AQ13522 171 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 ENDOGQ14249 297 aaKnown RBP2□□□□□ -2.09
CALCOCO2-223ENST00000514267 TAF9Q16594 264 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 C4orf26Q17RF5 130 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 C10orf128Q5T292 105 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 FAM27BQ5VT28 67 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 ZFAND6Q6FIF0 208 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 LPCAT3Q6P1A2 487 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 ALKAL2Q6UX46 152 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 SPNS3Q6ZMD2 512 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 SMIM15Q7Z3B0 74 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 FAM19A5Q7Z5A7 132 aaPredicted RBP2□□□□□ -2.09
CALCOCO2-223ENST00000514267 LYG2Q86SG7 212 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 SLC51BQ86UW2 128 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 NAA40Q86UY6 237 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 SGPP2Q8IWX5 399 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 OR13C8Q8NGS7 320 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 OR10D3Q8NH80 312 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 TERB2Q8NHR7 220 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 PP6455Q8WZ26 134 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 RBPMSQ93062 196 aaKnown RBP2□□□□□ -2.09
CALCOCO2-223ENST00000514267 LINC01587Q99440 93 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 CMSS1Q9BQ75 279 aaKnown RBP2□□□□□ -2.09
CALCOCO2-223ENST00000514267 DDA1Q9BW61 102 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 PECRQ9BY49 303 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 ALX4Q9H161 411 aaPredicted RBP2□□□□□ -2.09
CALCOCO2-223ENST00000514267 LPAR5Q9H1C0 372 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 MS4A6AQ9H2W1 248 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 PRO3102Q9H379 93 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 CYTL1Q9NRR1 136 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 CTNNBIP1Q9NSA3 81 aaPredicted RBP2□□□□□ -2.09
CALCOCO2-223ENST00000514267 ASF1BQ9NVP2 202 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 TMEM38BQ9NVV0 291 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 ZNF230Q9UIE0 474 aaPredicted RBP2□□□□□ -2.09
CALCOCO2-223ENST00000514267 MCTS1Q9ULC4 181 aaKnown RBP2□□□□□ -2.09
CALCOCO2-223ENST00000514267 V9GYS6 101 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 KNL1Q8NG31 2342 aa2□□□□□ -2.09
CALCOCO2-223ENST00000514267 MPDZO75970 2070 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 BRWD1Q9NSI6 2320 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 TGIF2-C20orf24A0A0A6YYL0 155 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 IGHV3-43A0A0B4J1X8 118 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 C5orf49A4QMS7 147 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 OR6C6A6NF89 314 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 ZNF98A6NK75 572 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 C8orf87E5RJ46 101 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 TRAPPC2LH3BP13 241 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 MFNGO00587 321 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 SFT2D2O95562 160 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 MPC2O95563 127 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 CFDP00746 253 aaPredicted RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 APOC3P02656 99 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 IGLV7-43P04211 117 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 ZNF728P0DKX0 622 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 SLC25A4P12235 298 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 TPT1P13693 172 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 CCL1P22362 96 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 S100GP29377 79 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 RPL12P30050 165 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 OPRM1P35372 400 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 H2BFSP57053 126 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 EIF5AP63241 154 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 HIST1H3AP68431 136 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 H3F3AP84243 136 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 PSG4Q00888 419 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 DEFA5Q01523 94 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 EIF3IQ13347 325 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 OR2F1Q13607 317 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 HIST3H3Q16695 136 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 TMEM128Q5BJH2 165 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 PABPC1L2AQ5JQF8 200 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 HIST2H3PS2Q5TEC6 136 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 EIF5AL1Q6IS14 154 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 SLC25A34Q6PIV7 304 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 HIST2H3AQ71DI3 136 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 C6orf201Q7Z4U5 140 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 DPPA2Q7Z7J5 298 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 OR5AS1Q8N127 324 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 GATD1Q8NB37 220 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 PXT1Q8NFP0 134 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 RNASE11Q8TAA1 199 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 FNDC9Q8TBE3 224 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 PPP1R1CQ8WVI7 109 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 ITLN2Q8WWU7 325 aaPredicted RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 ZNF2Q9BSG1 426 aaPredicted RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 OR2H1Q9GZK4 316 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 CHST5Q9GZS9 411 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 FBXL15Q9H469 300 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 ZNF286AQ9HBT8 521 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 PROK2Q9HC23 129 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 AK3Q9UIJ7 227 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 TP53TG1Q9Y2A0 90 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 LSM5Q9Y4Y9 91 aaKnown RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 ZNF706Q9Y5V0 76 aaPredicted RBP1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 SDK1Q7Z5N4 2213 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 EML5Q05BV3 1969 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 RP1P56715 2156 aa1.99□□□□□ -2.09
CALCOCO2-223ENST00000514267 UNC79Q9P2D8 2635 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms