RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 RNF182Q8N6D2 247 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 ZBTB8BQ8NAP8 495 aaPredicted RBP4.68□□□□□ -1.66
CLDND1-229ENST00000513988 OR8A1Q8NGG7 326 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 OR4A16Q8NH70 328 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 SLC35E1Q96K37 410 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 USH2AO75445 5202 aa4.68□□□□□ -1.66
CLDND1-229ENST00000513988 SPINK4O60575 86 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 CHTF8P0CG12 524 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 RNASE2P10153 161 aaKnown RBP4.67□□□□□ -1.66
CLDND1-229ENST00000513988 HOXB6P17509 224 aaKnown RBP4.67□□□□□ -1.66
CLDND1-229ENST00000513988 MAPK3P27361 379 aaPredicted RBP4.67□□□□□ -1.66
CLDND1-229ENST00000513988 LPAR6P43657 344 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 RPL5P46777 297 aaKnown RBP4.67□□□□□ -1.66
CLDND1-229ENST00000513988 GALR1P47211 349 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 MS4A2Q01362 244 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 GFI1BQ5VTD9 330 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 DAZ4Q86SG3 579 aaKnown RBP4.67□□□□□ -1.66
CLDND1-229ENST00000513988 PRR26Q8N8Z3 221 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 C11orf72Q8NBR9 251 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 OR52I1Q8NGK6 324 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 CIB1Q99828 191 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 PYGO2Q9BRQ0 406 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 RSG1Q9BU20 258 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 SLC5A7Q9GZV3 580 aa4.67□□□□□ -1.66
CLDND1-229ENST00000513988 DAZ3Q9NR90 486 aaKnown RBP4.67□□□□□ -1.66
CLDND1-229ENST00000513988 MRPL16Q9NX20 251 aaKnown RBP4.67□□□□□ -1.66
CLDND1-229ENST00000513988 ATG12O94817 140 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 PSG1P11464 419 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 CRYGAP11844 174 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 GADD45AP24522 165 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 F2RP25116 425 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 CBX5P45973 191 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 OR10A3P58181 314 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 CNIH2Q6PI25 160 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 SLC35G3Q8N808 338 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 CCDC71LQ8N9Z2 235 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 ZNF555Q8NEP9 628 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 FCAMRQ8WWV6 532 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 AMBNQ9NP70 447 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 MED4Q9NPJ6 270 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 PLAC8Q9NZF1 115 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 KLF12Q9Y4X4 402 aa4.66□□□□□ -1.66
CLDND1-229ENST00000513988 TRAV12-3A0A0B4J271 114 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 LOC100131303A0A0U1RQF7 123 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 PNMA8CA0A1B0GUJ8 204 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 G3V2T6 193 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 SFTA3P0C7M3 94 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 SLC25A4P12235 298 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 HIST1H1DP16402 221 aaKnown RBP4.65□□□□□ -1.67
CLDND1-229ENST00000513988 DTYMKP23919 212 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 ETV1P50549 477 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 TCL1AP56279 114 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 CNBPP62633 177 aaKnown RBP4.65□□□□□ -1.67
CLDND1-229ENST00000513988 RPL19P84098 196 aaKnown RBP4.65□□□□□ -1.67
CLDND1-229ENST00000513988 PRSS54Q6PEW0 395 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 CCDC190Q86UF4 302 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 IQCF2Q8IXL9 164 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 Q8TAT8 98 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 SPACA4Q8TDM5 124 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 CHAC2Q8WUX2 184 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 RRNAD1Q96FB5 475 aaKnown RBP4.65□□□□□ -1.67
CLDND1-229ENST00000513988 ATP6V1G3Q96LB4 118 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 GABARAPL3Q9BY60 117 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 PLGRKTQ9HBL7 147 aa4.65□□□□□ -1.67
CLDND1-229ENST00000513988 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.67
CLDND1-229ENST00000513988 TRAV8-2A0A0B4J237 113 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 J3KRW8 73 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 FKBP6O75344 327 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 RLN1P04808 185 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 FXYD4P59646 89 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 MEF2DQ14814 521 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 HSD17B12Q53GQ0 312 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 ZNF818PQ6ZRF7 136 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 H2BFWTQ7Z2G1 175 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 C10orf67Q8IYJ2 551 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 OR5H2Q8NGV7 314 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 OR10R2Q8NGX6 335 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 PHYHIPQ92561 330 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 C2orf50Q96LR7 162 aa4.64□□□□□ -1.67
CLDND1-229ENST00000513988 PARD6GQ9BYG4 376 aaPredicted RBP4.64□□□□□ -1.67
CLDND1-229ENST00000513988 USP17L23D6RBM5 183 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 INS-IGF2F8WCM5 200 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 PPYP01298 95 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 PRSS1P07477 247 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 PFN1P07737 140 aaKnown RBP4.63□□□□□ -1.67
CLDND1-229ENST00000513988 FCGR2CP31995 323 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 HRH1P35367 487 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 LYZP61626 148 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 VWC2Q2TAL6 325 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 NPIPB3Q92617 1050 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 CCDC124Q96CT7 223 aaKnown RBP4.63□□□□□ -1.67
CLDND1-229ENST00000513988 ACY3Q96HD9 319 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 ZNF479Q96JC4 524 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 DNAJC30Q96LL9 226 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 SLC25A32Q9H2D1 315 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 SLC25A22Q9H936 323 aa4.63□□□□□ -1.67
CLDND1-229ENST00000513988 AQP12BA6NM10 295 aa4.62□□□□□ -1.67
CLDND1-229ENST00000513988 SLC17A2O00624 439 aa4.62□□□□□ -1.67
CLDND1-229ENST00000513988 TMEM183BQ1AE95 376 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms