RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 OR10G7Q8NGN6 311 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 OR1P1Q8NH06 330 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 PFDN5Q99471 154 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 P2RX4Q99571 388 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 NPCDR1Q9BY65 106 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 ZNF430Q9H8G1 570 aaPredicted RBP3.48□□□□□ -1.85
CLDND1-228ENST00000513873 WFDC1Q9HC57 220 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 MANBALQ9NQG1 85 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 PRELID1Q9Y255 219 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 DSCAMO60469 2012 aa3.48□□□□□ -1.85
CLDND1-228ENST00000513873 IGHV4-30-2A0A087WSY4 118 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 IGHV3-72A0A0B4J1Y9 119 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 TRAV3A0A0B4J244 114 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 CTXND1A0A1B0GTU2 59 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 ZFP92A6NM28 416 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 SRRM4A7MD48 611 aaKnown RBP3.47□□□□□ -1.85
CLDND1-228ENST00000513873 F8W036 122 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 RNASEK-C17orf49H0YIS7 233 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 FCN3O75636 299 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 NDUFA3O95167 84 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 SNAPINO95295 136 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 CXorf1O96002 111 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 IGLV2-23P01705 113 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 OPN1MWP04001 364 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 HSPB1P04792 205 aaKnown RBP3.47□□□□□ -1.85
CLDND1-228ENST00000513873 CRYGBP07316 175 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 OPN1MW2P0DN77 364 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 OPN1MW3P0DN78 364 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 SAA4P35542 130 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 NPBWR1P48145 328 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 B2MP61769 119 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 PAX2Q02962 417 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 FXYD3Q14802 87 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 GUK1Q16774 197 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 TMEM249Q2WGJ8 235 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 FAM74A3Q4VXF1 159 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 KHDC3LQ587J8 217 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 SPINK9Q5DT21 86 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 CYB5R2Q6BCY4 276 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 PRR27Q6MZM9 219 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 SLC16A13Q7RTY0 426 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 SGMS2Q8NHU3 365 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 LYPD6BQ8NI32 183 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 GATAD1Q8WUU5 269 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 MBD3L1Q8WWY6 194 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 SRSF12Q8WXF0 261 aaKnown RBP3.47□□□□□ -1.85
CLDND1-228ENST00000513873 ARPC1AQ92747 370 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 TBX15Q96SF7 602 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 SEC11CQ9BY50 192 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 MRPL32Q9BYC8 188 aaKnown RBP3.47□□□□□ -1.85
CLDND1-228ENST00000513873 NKX6-2Q9C056 277 aaPredicted RBP3.47□□□□□ -1.85
CLDND1-228ENST00000513873 SLC35B3Q9H1N7 401 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 TMEM167BQ9NRX6 74 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 VAX2Q9UIW0 290 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 PYGO1Q9Y3Y4 419 aa3.47□□□□□ -1.85
CLDND1-228ENST00000513873 F11RQ9Y624 299 aaKnown RBP3.47□□□□□ -1.85
CLDND1-228ENST00000513873 ANK3Q12955 4377 aaKnown RBP3.47□□□□□ -1.85
CLDND1-228ENST00000513873 YLPM1P49750 1951 aaKnown RBP3.46□□□□□ -1.86
CLDND1-228ENST00000513873 CENPVL3A0A0U1RRI6 287 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 A0A1W2PRD5 423 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 A0A1W2PRF3 423 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 A0A1W2PRM7 423 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 TMEM218A2RU14 115 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 MAP1LC3B2A6NCE7 125 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 RBFOX3A6NFN3 312 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 AGPAT2O15120 278 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 PDE6DO43924 150 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 COX7A2P2O60397 106 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 CLN5O75503 358 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 CDK2AP2O75956 126 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 TGFAP01135 160 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 HLA-DRB1P01911 266 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 RNASE2P10153 161 aaKnown RBP3.46□□□□□ -1.86
CLDND1-228ENST00000513873 HNF1AP20823 631 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 CDC34P49427 236 aaPredicted RBP3.46□□□□□ -1.86
CLDND1-228ENST00000513873 DEFA5Q01523 94 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 ZNF415Q09FC8 603 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 KLRD1Q13241 179 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 DIAPH2-AS1Q14236 149 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 BSXQ3C1V8 233 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 SOHLH1Q5JUK2 328 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 CYP2G1PQ6ZSU1 146 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 SLC35E3Q7Z769 313 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 IQCF2Q8IXL9 164 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 BPIFCQ8NFQ6 507 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 RPUSD4Q96CM3 377 aaKnown RBP3.46□□□□□ -1.86
CLDND1-228ENST00000513873 ACY3Q96HD9 319 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 ATP6V0BQ99437 205 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 TRGV9Q99603 122 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 TXN2Q99757 166 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 TCEAL7Q9BRU2 100 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 RSG1Q9BU20 258 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 KRTAP4-3Q9BYR4 195 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 REG4Q9BYZ8 158 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 MAP1LC3BQ9GZQ8 125 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 GFRA4Q9GZZ7 299 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 SH3BGRL3Q9H299 93 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 FBXL15Q9H469 300 aa3.46□□□□□ -1.86
CLDND1-228ENST00000513873 DNAJC4Q9NNZ3 241 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms