RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 IGHV2-26A0A0B4J1V2 119 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 TOMM40O96008 361 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 VWC2Q2TAL6 325 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 PVRIGQ6DKI7 326 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 GAFA1Q96PS6 74 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 SPTAN1Q13813 2472 aaKnown RBP6.3□□□□□ -1.4
CLCN3-209ENST00000513761 FREM1Q5H8C1 2179 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 FRMD6-AS1P0C7T7 363 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 ESDP10768 282 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 CFHR2P36980 270 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 CLEC19AQ6UXS0 136 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 Q8NFD4 153 aa6.3□□□□□ -1.4
CLCN3-209ENST00000513761 NXT2Q9NPJ8 142 aaKnown RBP6.3□□□□□ -1.4
CLCN3-209ENST00000513761 ZNF256Q9Y2P7 627 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-209ENST00000513761 COX6CP09669 75 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 ZNF56Q15929 161 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 TRGV9Q99603 122 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 UTRNP46939 3433 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 TIMM23O14925 209 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 NBR2O15453 112 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 PRSS57Q6UWY2 283 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 C11orf52Q96A22 123 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 Q86TA4 180 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 SLC25A15Q9Y619 301 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 LY6G6EA0A0G2JKS1 128 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 FNDC10F2Z333 226 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 CEACAM8P31997 349 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-209ENST00000513761 ID1P41134 155 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 TMPRSS3P57727 454 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 ATP5G2Q06055 141 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 U3KQA8 63 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 B9A039 149 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
CLCN3-209ENST00000513761 RAB9AP51151 201 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 GAGE13Q4V321 117 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 MDS2Q8NDY4 140 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 C11orf1Q9H5F2 150 aa6.29□□□□□ -1.4
CLCN3-209ENST00000513761 TMEM213A2RRL7 107 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 PLSCR4Q9NRQ2 329 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 KIAA1549LQ6ZVL6 1849 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 A0A1W2PPI3 338 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 C15orf65H3BRN8 121 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 SH2D1AO60880 128 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 LY6EQ16553 131 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 GLMPQ8WWB7 406 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 EEF1AKMT3Q96AZ1 226 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 ITGB1BP1O14713 200 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 PPBPP02775 128 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 LCNL1Q6ZST4 164 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 SMAD7O15105 426 aaKnown RBP6.28□□□□□ -1.4
CLCN3-209ENST00000513761 CRXO43186 299 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-209ENST00000513761 HOXA3O43365 443 aaPredicted RBP6.28□□□□□ -1.4
CLCN3-209ENST00000513761 ASIPP42127 132 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 EMP1P54849 157 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 RNASE8Q8TDE3 154 aaKnown RBP6.28□□□□□ -1.4
CLCN3-209ENST00000513761 PSG3Q16557 428 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 ZC2HC1BQ5TFG8 222 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 FAM159AQ6UWV7 190 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 ODF3L1Q8IXM7 274 aa6.28□□□□□ -1.4
CLCN3-209ENST00000513761 SNCGO76070 127 aa6.27□□□□□ -1.4
CLCN3-209ENST00000513761 PSMG4Q5JS54 123 aa6.27□□□□□ -1.4
CLCN3-209ENST00000513761 BVES-AS1Q5T3Y7 98 aa6.27□□□□□ -1.4
CLCN3-209ENST00000513761 EBLN2Q6P2I7 272 aa6.27□□□□□ -1.4
CLCN3-209ENST00000513761 Q6ZPA2 131 aa6.27□□□□□ -1.4
CLCN3-209ENST00000513761 NUP210Q8TEM1 1887 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-209ENST00000513761 ZNF815PA8K554 130 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 IGHV1-8P0DP01 117 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 PAX2Q02962 417 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 SRSF1Q07955 248 aaKnown RBP eCLIP6.27□□□□□ -1.41
CLCN3-209ENST00000513761 SRSF6Q13247 344 aaKnown RBP6.27□□□□□ -1.41
CLCN3-209ENST00000513761 Q6ZSR3 168 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 KIF26AQ9ULI4 1882 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-209ENST00000513761 ZNF883P0CG24 379 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 RNASE4P34096 147 aaKnown RBP6.27□□□□□ -1.41
CLCN3-209ENST00000513761 PRR20EP86478 221 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 PRR20CP86479 221 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 PRR20DP86480 221 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 PRR20BP86481 221 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 PRR20AP86496 221 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 MMP23AO75900 390 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 SSBP2P81877 361 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-209ENST00000513761 CD300EQ496F6 205 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-209ENST00000513761 CHTOPQ9Y3Y2 248 aaKnown RBP6.27□□□□□ -1.41
CLCN3-209ENST00000513761 WDR87Q6ZQQ6 2873 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 C17orf58Q2M2W7 97 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 LYPD2Q6UXB3 125 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 SYT8Q8NBV8 401 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 DNAH12Q6ZR08 3092 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 TRAV8-2A0A0B4J237 113 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 SRRM4A7MD48 611 aaKnown RBP6.27□□□□□ -1.41
CLCN3-209ENST00000513761 CRIP3Q6Q6R5 217 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 ADAMTSL5Q6ZMM2 481 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 TMEM158Q8WZ71 300 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 NDUFA4L2Q9NRX3 87 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 CYSLTR1Q9Y271 337 aa6.27□□□□□ -1.41
CLCN3-209ENST00000513761 CENPFP49454 3210 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 ABCA4P78363 2273 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 IGHV1-3A0A0C4DH29 117 aa6.26□□□□□ -1.41
CLCN3-209ENST00000513761 IGLC7A0M8Q6 106 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms