RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 AQP10Q96PS8 301 aa12.93□□□□□ -0.34
DDR1-270ENST00000513043 RSG1Q9BU20 258 aa12.93□□□□□ -0.34
DDR1-270ENST00000513043 hCG_2014768A0A024R1R8 64 aa12.92□□□□□ -0.34
DDR1-270ENST00000513043 GALR1P47211 349 aa12.92□□□□□ -0.34
DDR1-270ENST00000513043 GCSAMLQ5JQS6 135 aa12.92□□□□□ -0.34
DDR1-270ENST00000513043 MORN5Q5VZ52 161 aa12.92□□□□□ -0.34
DDR1-270ENST00000513043 INO80EQ8NBZ0 244 aaPredicted RBP12.92□□□□□ -0.34
DDR1-270ENST00000513043 DNAJC4Q9NNZ3 241 aa12.92□□□□□ -0.34
DDR1-270ENST00000513043 ELOA3CA0A087WX78 387 aaPredicted RBP12.91□□□□□ -0.34
DDR1-270ENST00000513043 RNF222A6NCQ9 220 aa12.91□□□□□ -0.34
DDR1-270ENST00000513043 CMC4P56277 68 aaPredicted RBP12.91□□□□□ -0.34
DDR1-270ENST00000513043 S100A7AQ86SG5 101 aa12.91□□□□□ -0.34
DDR1-270ENST00000513043 OR1L4Q8NGR5 311 aa12.91□□□□□ -0.34
DDR1-270ENST00000513043 TNFSF18Q9UNG2 199 aa12.91□□□□□ -0.34
DDR1-270ENST00000513043 RFNGQ9Y644 331 aa12.91□□□□□ -0.34
DDR1-270ENST00000513043 TRAV5A0A0B4J249 113 aa12.9□□□□□ -0.34
DDR1-270ENST00000513043 RPL35AP18077 110 aaKnown RBP12.9□□□□□ -0.34
DDR1-270ENST00000513043 PSMG4Q5JS54 123 aa12.9□□□□□ -0.34
DDR1-270ENST00000513043 GPR82Q96P67 336 aa12.9□□□□□ -0.34
DDR1-270ENST00000513043 PFDN5Q99471 154 aa12.9□□□□□ -0.34
DDR1-270ENST00000513043 FAM110AQ9BQ89 295 aa12.9□□□□□ -0.34
DDR1-270ENST00000513043 C17orf112F2Z3M2 114 aa12.89□□□□□ -0.35
DDR1-270ENST00000513043 ARPC5O15511 151 aa12.89□□□□□ -0.35
DDR1-270ENST00000513043 SNRPCP09234 159 aaKnown RBP12.89□□□□□ -0.35
DDR1-270ENST00000513043 RPL7P18124 248 aaKnown RBP12.89□□□□□ -0.35
DDR1-270ENST00000513043 ATF4P18848 351 aaPredicted RBP12.89□□□□□ -0.35
DDR1-270ENST00000513043 HAGHQ16775 308 aa12.89□□□□□ -0.35
DDR1-270ENST00000513043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.89□□□□□ -0.35
DDR1-270ENST00000513043 C17orf77Q96MU5 243 aa12.89□□□□□ -0.35
DDR1-270ENST00000513043 KCNIP2Q9NS61 270 aa12.89□□□□□ -0.35
DDR1-270ENST00000513043 LOC102724200A0A096LPH7 203 aaPredicted RBP12.88□□□□□ -0.35
DDR1-270ENST00000513043 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
DDR1-270ENST00000513043 SNRPD3P62318 126 aaKnown RBP12.88□□□□□ -0.35
DDR1-270ENST00000513043 FFAR4Q5NUL3 377 aa12.88□□□□□ -0.35
DDR1-270ENST00000513043 LINC00322Q6ZN03 302 aaPredicted RBP12.88□□□□□ -0.35
DDR1-270ENST00000513043 LINC00052Q96N35 136 aa12.88□□□□□ -0.35
DDR1-270ENST00000513043 SOCS3O14543 225 aa12.87□□□□□ -0.35
DDR1-270ENST00000513043 IGFL4Q6B9Z1 124 aa12.87□□□□□ -0.35
DDR1-270ENST00000513043 HSD17B11Q8NBQ5 300 aa12.87□□□□□ -0.35
DDR1-270ENST00000513043 GATAD1Q8WUU5 269 aa12.87□□□□□ -0.35
DDR1-270ENST00000513043 C16orf92Q96LL3 132 aa12.87□□□□□ -0.35
DDR1-270ENST00000513043 PARD6GQ9BYG4 376 aaPredicted RBP12.87□□□□□ -0.35
DDR1-270ENST00000513043 H3BTX0 84 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 ID1P41134 155 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 MEOX2P50222 304 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 DEFB1P60022 68 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 ZNF266Q14584 549 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 FAM78BQ5VT40 261 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 SPATA31B1PQ5VZV4 182 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 BPIFA4PQ86YQ2 179 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 OR11H4Q8NGC9 324 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 ST6GAL2Q96JF0 529 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 MFFQ9GZY8 342 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 RNF24Q9Y225 148 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 COL7A1Q02388 2944 aa12.86□□□□□ -0.35
DDR1-270ENST00000513043 MRPS12O15235 138 aaKnown RBP12.85□□□□□ -0.35
DDR1-270ENST00000513043 PSMB3P49720 205 aa12.85□□□□□ -0.35
DDR1-270ENST00000513043 ACTL10Q5JWF8 245 aa12.85□□□□□ -0.35
DDR1-270ENST00000513043 RPL7L1Q6DKI1 246 aaKnown RBP12.85□□□□□ -0.35
DDR1-270ENST00000513043 STHQ8IWL8 128 aa12.85□□□□□ -0.35
DDR1-270ENST00000513043 C20orf173Q96LM9 149 aa12.85□□□□□ -0.35
DDR1-270ENST00000513043 SEPSECSQ9HD40 501 aaKnown RBP12.85□□□□□ -0.35
DDR1-270ENST00000513043 RETNQ9HD89 108 aa12.85□□□□□ -0.35
DDR1-270ENST00000513043 ISLRO14498 428 aa12.84□□□□□ -0.35
DDR1-270ENST00000513043 NHLRC4P0CG21 123 aaPredicted RBP12.84□□□□□ -0.35
DDR1-270ENST00000513043 MIR17HGQ75NE6 70 aa12.84□□□□□ -0.35
DDR1-270ENST00000513043 RNF182Q8N6D2 247 aa12.84□□□□□ -0.35
DDR1-270ENST00000513043 LRRC20Q8TCA0 184 aa12.84□□□□□ -0.35
DDR1-270ENST00000513043 A0A087X0K7 114 aa12.83□□□□□ -0.36
DDR1-270ENST00000513043 TRAV8-2A0A0B4J237 113 aa12.83□□□□□ -0.36
DDR1-270ENST00000513043 A0A1B0GVG6 124 aa12.83□□□□□ -0.36
DDR1-270ENST00000513043 EIF3GO75821 320 aaKnown RBP eCLIP12.83□□□□□ -0.36
DDR1-270ENST00000513043 PRB4P10163 310 aaPredicted RBP12.83□□□□□ -0.36
DDR1-270ENST00000513043 ATP6V0CP27449 155 aa12.83□□□□□ -0.36
DDR1-270ENST00000513043 TM2D3Q9BRN9 247 aa12.83□□□□□ -0.36
DDR1-270ENST00000513043 ZMAT4Q9H898 229 aa12.83□□□□□ -0.36
DDR1-270ENST00000513043 BORCS7-ASMTA0A0B4J1R7 106 aa12.82□□□□□ -0.36
DDR1-270ENST00000513043 H3BQ15 152 aa12.82□□□□□ -0.36
DDR1-270ENST00000513043 PYYP10082 97 aa12.82□□□□□ -0.36
DDR1-270ENST00000513043 HLA-DMBP28068 263 aa12.82□□□□□ -0.36
DDR1-270ENST00000513043 APOC4P55056 127 aa12.82□□□□□ -0.36
DDR1-270ENST00000513043 SAMD13Q5VXD3 122 aa12.82□□□□□ -0.36
DDR1-270ENST00000513043 SLC25A2Q9BXI2 301 aa12.82□□□□□ -0.36
DDR1-270ENST00000513043 SH3BGRL3Q9H299 93 aa12.82□□□□□ -0.36
DDR1-270ENST00000513043 TIMM9Q9Y5J7 89 aa12.82□□□□□ -0.36
DDR1-270ENST00000513043 DNAH9Q9NYC9 4486 aa12.82□□□□□ -0.36
DDR1-270ENST00000513043 F6UB75 175 aa12.81□□□□□ -0.36
DDR1-270ENST00000513043 SLC17A3O00476 420 aa12.81□□□□□ -0.36
DDR1-270ENST00000513043 IGLC2P0DOY2 106 aa12.81□□□□□ -0.36
DDR1-270ENST00000513043 RAB2AP61019 212 aa12.81□□□□□ -0.36
DDR1-270ENST00000513043 ACOT6Q3I5F7 207 aaPredicted RBP12.81□□□□□ -0.36
DDR1-270ENST00000513043 GDF5OSQ5U4N7 250 aa12.81□□□□□ -0.36
DDR1-270ENST00000513043 FAM167A-AS1Q96KT0 104 aa12.81□□□□□ -0.36
DDR1-270ENST00000513043 RCHY1Q96PM5 261 aa12.81□□□□□ -0.36
DDR1-270ENST00000513043 SPATA25Q9BR10 227 aa12.81□□□□□ -0.36
DDR1-270ENST00000513043 MRPL32Q9BYC8 188 aaKnown RBP12.81□□□□□ -0.36
DDR1-270ENST00000513043 FUT9Q9Y231 359 aa12.81□□□□□ -0.36
DDR1-270ENST00000513043 U3KQK5 164 aa12.81□□□□□ -0.36
DDR1-270ENST00000513043 HMSDA8MTL9 139 aa12.8□□□□□ -0.36
DDR1-270ENST00000513043 IGKV3-20P01619 116 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms