RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 PRSS22Q9GZN4 317 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 C7orf69Q9H7B7 122 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 LAMA2P24043 3122 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 IGHV3OR16-8A0A075B7F1 116 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 IL18BPO95998 194 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 PAX1P15863 534 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 ADCYAP1P18509 176 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 GNLYP22749 145 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 GAS1P54826 345 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 PCOLCEQ15113 449 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 LINC01560Q8TB33 94 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 TDRD6O60522 2096 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 COX8AP10176 69 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 TMEM30BQ3MIR4 351 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 MCRIP2Q9BUT9 160 aaKnown RBP7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 C1QTNF5Q9BXJ0 243 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 IGLL1P15814 213 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 LTBRP36941 435 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 LY96Q9Y6Y9 160 aa7.23□□□□□ -1.25
LIMCH1-218ENST00000513024 SAP30O75446 220 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 ACYP1P07311 99 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 FGF6P10767 208 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 AMTNQ6UX39 209 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 C8orf86Q6ZUL3 223 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 WFDC1Q9HC57 220 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 CYTL1Q9NRR1 136 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 PEMTQ9UBM1 199 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 IGKV1D-13A0A0B4J2D9 117 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 IGKV1-13P0DP09 117 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 IGFBP3P17936 291 aaPredicted RBP7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 TMEM42Q69YG0 159 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 PSG8Q9UQ74 426 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 MPDZO75970 2070 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 IGHV3-66A0A0C4DH42 116 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 PRSS29PA6NIE9 313 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 DEPPQ9NTK1 212 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 TRBV6-7A0A0A0MS04 114 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 A0A1W2PR77 199 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 IGHMP01871 453 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 PPIFP30405 207 aaKnown RBP7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 PPP1R32Q7Z5V6 425 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 SIGLEC12Q96PQ1 595 aa7.22□□□□□ -1.25
LIMCH1-218ENST00000513024 ID3Q02535 119 aa7.21□□□□□ -1.25
LIMCH1-218ENST00000513024 VSIRQ9H7M9 311 aa7.21□□□□□ -1.25
LIMCH1-218ENST00000513024 WISP1O95388 367 aa7.21□□□□□ -1.25
LIMCH1-218ENST00000513024 IGHV3-23P01764 117 aa7.21□□□□□ -1.25
LIMCH1-218ENST00000513024 PRR31Q5SQ13 230 aa7.21□□□□□ -1.25
LIMCH1-218ENST00000513024 RASL10AQ92737 203 aa7.21□□□□□ -1.25
LIMCH1-218ENST00000513024 TAL2Q16559 108 aa7.21□□□□□ -1.26
LIMCH1-218ENST00000513024 TMEM190Q8WZ59 177 aa7.21□□□□□ -1.26
LIMCH1-218ENST00000513024 F8WEM9 126 aa7.21□□□□□ -1.26
LIMCH1-218ENST00000513024 TIMM23O14925 209 aa7.21□□□□□ -1.26
LIMCH1-218ENST00000513024 IFI6P09912 130 aa7.21□□□□□ -1.26
LIMCH1-218ENST00000513024 DEFB125Q8N687 156 aa7.21□□□□□ -1.26
LIMCH1-218ENST00000513024 CARD19Q96LW7 228 aa7.21□□□□□ -1.26
LIMCH1-218ENST00000513024 PRO1854Q9UHT4 67 aa7.21□□□□□ -1.26
LIMCH1-218ENST00000513024 RALGAPA1Q6GYQ0 2036 aa7.21□□□□□ -1.26
LIMCH1-218ENST00000513024 IGLV3-19P01714 112 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 PRB4P10163 310 aaPredicted RBP7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 CD59P13987 128 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 FAM201AQ5SY85 155 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 ZNF837Q96EG3 531 aaPredicted RBP7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 A0A1B0GX51 115 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 TEX43Q6ZNM6 134 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 Q6ZWC4 215 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 TMEM158Q8WZ71 300 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 C18orf12Q96KH6 178 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 WDR83OSQ9Y284 106 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 IGKV1D-8A0A087WSZ0 117 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 FAM236AA0A1B0GUQ0 79 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 FAM236BA0A1B0GV22 79 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 UPK2O00526 184 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 EFNB3Q15768 340 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 NUP35Q8NFH5 326 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 VOPP1Q96AW1 172 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 MESP1Q9BRJ9 268 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 IGLC7A0M8Q6 106 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 INS-IGF2F8WCM5 200 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 INSP01308 110 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 LYL1P12980 280 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 GFI1Q99684 422 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 RFNGQ9Y644 331 aa7.2□□□□□ -1.26
LIMCH1-218ENST00000513024 TRAV12-1A0A0B4J245 112 aa7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 ZNF138P52744 262 aa7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 FXYD7P58549 80 aa7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 SH2D6Q7Z4S9 175 aa7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 PAQR4Q8N4S7 273 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 TMEM54Q969K7 222 aa7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 SPANXB1Q9NS25 103 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 KLF2Q9Y5W3 355 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 TRAV40A0A0B4J280 105 aa7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 IGKV1-9A0A0C4DH69 117 aa7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 A0A0U1RQV1 116 aa7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 MST1P26927 711 aa7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 VDAC2P45880 294 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 IGLV3-21P80748 117 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 OSR1Q8TAX0 266 aaPredicted RBP7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 PLCE1Q9P212 2302 aa7.19□□□□□ -1.26
LIMCH1-218ENST00000513024 J3QW42 95 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms