RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PLA2G10O15496 165 aa8.94□□□□□ -0.98
VEGFA-216ENST00000512683 GATA2P23769 480 aaPredicted RBP8.94□□□□□ -0.98
VEGFA-216ENST00000512683 GALR1P47211 349 aa8.94□□□□□ -0.98
VEGFA-216ENST00000512683 EMP1P54849 157 aa8.94□□□□□ -0.98
VEGFA-216ENST00000512683 RRN3P1Q2M238 152 aa8.94□□□□□ -0.98
VEGFA-216ENST00000512683 C15orf53Q8NAA6 179 aa8.94□□□□□ -0.98
VEGFA-216ENST00000512683 OR4B1Q8NGF8 309 aa8.94□□□□□ -0.98
VEGFA-216ENST00000512683 GPR82Q96P67 336 aa8.94□□□□□ -0.98
VEGFA-216ENST00000512683 STRAPQ9Y3F4 350 aaKnown RBP8.94□□□□□ -0.98
VEGFA-216ENST00000512683 A0A0J9YX75 114 aa8.93□□□□□ -0.98
VEGFA-216ENST00000512683 M0R2N4 97 aa8.93□□□□□ -0.98
VEGFA-216ENST00000512683 FAM78BQ5VT40 261 aa8.93□□□□□ -0.98
VEGFA-216ENST00000512683 ACOT7LQ6ZUV0 252 aa8.93□□□□□ -0.98
VEGFA-216ENST00000512683 PPP1R14BQ96C90 147 aa8.93□□□□□ -0.98
VEGFA-216ENST00000512683 IGF2BP2-AS1Q96M15 143 aa8.93□□□□□ -0.98
VEGFA-216ENST00000512683 C7orf50Q9BRJ6 194 aaKnown RBP8.93□□□□□ -0.98
VEGFA-216ENST00000512683 RYR1P21817 5038 aa8.93□□□□□ -0.98
VEGFA-216ENST00000512683 IGHV3OR16-12A0A075B7B8 117 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 LOC102723971A0A1B0GUV8 181 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 ZNF98A6NK75 572 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 LYRM9A8MSI8 78 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 SSSCA1O60232 199 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 CCNKO75909 580 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 DUSP14O95147 198 aaKnown RBP8.92□□□□□ -0.98
VEGFA-216ENST00000512683 IGKV3-20P01619 116 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 C4orf46Q504U0 113 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 C1orf134Q5TEV5 83 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 TMEM144Q7Z5S9 345 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 C1orf158Q8N1D5 194 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 MITD1Q8WV92 249 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 SMIM8Q96KF7 97 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 C20orf173Q96LM9 149 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 SCRT1Q9BWW7 348 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 SLC25A32Q9H2D1 315 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 PSENENQ9NZ42 101 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 DOK5Q9P104 306 aa8.92□□□□□ -0.98
VEGFA-216ENST00000512683 YTHDF2Q9Y5A9 579 aaKnown RBP8.92□□□□□ -0.98
VEGFA-216ENST00000512683 A6NHS1 94 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 CENPXA8MT69 81 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 ORM2P19652 201 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 TSPOP30536 169 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 DAD1P61803 113 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 AKR1C1Q04828 323 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 TMEM14EPQ6UXP3 125 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 BPIFCQ8NFQ6 507 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 OR1B1Q8NGR6 318 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 C16orf92Q96LL3 132 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 NDUFA13Q9P0J0 144 aa8.91□□□□□ -0.98
VEGFA-216ENST00000512683 PKHD1P08F94 4074 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 F6UB75 175 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 FXYD7P58549 80 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 IAH1Q2TAA2 248 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-216ENST00000512683 CNPY1Q3B7I2 92 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 CYP2G1PQ6ZSU1 146 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 S100A7AQ86SG5 101 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 ZBTB8BQ8NAP8 495 aaPredicted RBP8.9□□□□□ -0.98
VEGFA-216ENST00000512683 TMEM208Q9BTX3 173 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 RSG1Q9BU20 258 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 SLC35B3Q9H1N7 401 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 C20orf85Q9H1P6 137 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 SLC25A22Q9H936 323 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 RNF24Q9Y225 148 aa8.9□□□□□ -0.98
VEGFA-216ENST00000512683 RCL1Q9Y2P8 373 aaKnown RBP8.9□□□□□ -0.98
VEGFA-216ENST00000512683 DYNC1H1Q14204 4646 aaKnown RBP8.89□□□□□ -0.99
VEGFA-216ENST00000512683 LYRM1O43325 122 aa8.89□□□□□ -0.99
VEGFA-216ENST00000512683 METTL15P1P0C7V9 234 aa8.89□□□□□ -0.99
VEGFA-216ENST00000512683 PLP1P60201 277 aa8.89□□□□□ -0.99
VEGFA-216ENST00000512683 DLK1P80370 383 aa8.89□□□□□ -0.99
VEGFA-216ENST00000512683 ARL16Q0P5N6 197 aa8.89□□□□□ -0.99
VEGFA-216ENST00000512683 TMEM88Q6PEY1 159 aa8.89□□□□□ -0.99
VEGFA-216ENST00000512683 AMTNQ6UX39 209 aa8.89□□□□□ -0.99
VEGFA-216ENST00000512683 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.89□□□□□ -0.99
VEGFA-216ENST00000512683 IGLV2-18A0A075B6J9 118 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 SMCO3A2RU48 225 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 FNDC10F2Z333 226 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 H3BRN7 92 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 SCGB1D2O95969 90 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 MBPP02686 304 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-216ENST00000512683 TCRBP04435 133 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 IL5P05113 134 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 TAS2R30P59541 319 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 RRAS2P62070 204 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-216ENST00000512683 ATG101Q9BSB4 218 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 SHANK2-AS3Q9BTD1 123 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 TMEM147Q9BVK8 224 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 SLC25A39Q9BZJ4 359 aaPredicted RBP8.88□□□□□ -0.99
VEGFA-216ENST00000512683 NPVFQ9HCQ7 196 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 PLA2G2EQ9NZK7 142 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 GSKIPQ9P0R6 139 aa8.88□□□□□ -0.99
VEGFA-216ENST00000512683 TRAV6A0A075B6T7 132 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 TRAV8-2A0A0B4J237 113 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 C7orf66A4D0T2 115 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 CBY3A6NI87 242 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 K7EPK0 472 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 CCSO14618 274 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 TSC22D2O75157 780 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 INSP01308 110 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 LINC00869P0C866 280 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 HTN3P15516 51 aa8.87□□□□□ -0.99
VEGFA-216ENST00000512683 IGFL4Q6B9Z1 124 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms