RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 GGTLC3B5MD39 225 aa6.53□□□□□ -1.36
NEK1-208ENST00000512193 CEACAM4O75871 244 aa6.53□□□□□ -1.36
NEK1-208ENST00000512193 LGALS3P17931 250 aaKnown RBP6.53□□□□□ -1.36
NEK1-208ENST00000512193 C17orf58Q2M2W7 97 aa6.53□□□□□ -1.36
NEK1-208ENST00000512193 SFTA2Q6UW10 78 aa6.53□□□□□ -1.36
NEK1-208ENST00000512193 C2orf88Q9BSF0 95 aa6.53□□□□□ -1.36
NEK1-208ENST00000512193 FNDC4Q9H6D8 234 aaPredicted RBP6.53□□□□□ -1.36
NEK1-208ENST00000512193 POLR3KQ9Y2Y1 108 aaPredicted RBP6.53□□□□□ -1.36
NEK1-208ENST00000512193 SPCS1Q9Y6A9 102 aa6.53□□□□□ -1.36
NEK1-208ENST00000512193 ALPK3Q96L96 1907 aa6.53□□□□□ -1.36
NEK1-208ENST00000512193 NUP210Q8TEM1 1887 aaPredicted RBP6.53□□□□□ -1.36
NEK1-208ENST00000512193 D6R8Y8 96 aa6.53□□□□□ -1.36
NEK1-208ENST00000512193 RNASE4P34096 147 aaKnown RBP6.53□□□□□ -1.36
NEK1-208ENST00000512193 C15orf32Q32M92 178 aa6.53□□□□□ -1.36
NEK1-208ENST00000512193 LYZL1Q6UWQ5 148 aa6.53□□□□□ -1.36
NEK1-208ENST00000512193 CHCHD1Q96BP2 118 aaKnown RBP6.53□□□□□ -1.36
NEK1-208ENST00000512193 BEX4Q9NWD9 120 aaPredicted RBP6.53□□□□□ -1.36
NEK1-208ENST00000512193 MED12LQ86YW9 2145 aa6.52□□□□□ -1.36
NEK1-208ENST00000512193 TLN1Q9Y490 2541 aaKnown RBP6.52□□□□□ -1.37
NEK1-208ENST00000512193 BUB1B-PAK6H3BSN5 160 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 CRXO43186 299 aaPredicted RBP6.52□□□□□ -1.37
NEK1-208ENST00000512193 DLEU1O43261 78 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 SNRPD3P62318 126 aaKnown RBP6.52□□□□□ -1.37
NEK1-208ENST00000512193 TMEM219Q86XT9 240 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.52□□□□□ -1.37
NEK1-208ENST00000512193 ITGB1BP1O14713 200 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 APOMO95445 188 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 C5orf64Q2M2E5 130 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 TPTE2P1Q5T6R2 138 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 CENPVQ7Z7K6 275 aaPredicted RBP6.52□□□□□ -1.37
NEK1-208ENST00000512193 FAM169BQ8N8A8 192 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 FAM168AQ92567 244 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 NHP2Q9NX24 153 aaKnown RBP6.52□□□□□ -1.37
NEK1-208ENST00000512193 JKAMPQ9P055 326 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 ZNF256Q9Y2P7 627 aaPredicted RBP6.52□□□□□ -1.37
NEK1-208ENST00000512193 E7EQL1 145 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 SRD5A1P18405 259 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 CNTFRP26992 372 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 LY6DQ14210 128 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 MPV17L2Q567V2 206 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 ZNF329Q86UD4 541 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 WFDC12Q8WWY7 111 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 CCL19Q99731 98 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 SLC50A1Q9BRV3 221 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 ST20Q9HBF5 79 aa6.52□□□□□ -1.37
NEK1-208ENST00000512193 SRRM4A7MD48 611 aaKnown RBP6.51□□□□□ -1.37
NEK1-208ENST00000512193 FNDC10F2Z333 226 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 TYMSP04818 313 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 LDLRAD2Q5SZI1 272 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 VMO1Q7Z5L0 202 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 NUP37Q8NFH4 326 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 MYO9AB2RTY4 2548 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 A0A0G2JLM5 398 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 WT1-ASQ06250 92 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 PRR30Q53SZ7 412 aaPredicted RBP6.51□□□□□ -1.37
NEK1-208ENST00000512193 SNHG12Q9BXW3 62 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 NDUFA4L2Q9NRX3 87 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 C2orf16Q68DN1 1984 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 C19orf67A6NJJ6 358 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 DEFB104AQ8WTQ1 72 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 MRPL16Q9NX20 251 aaKnown RBP6.51□□□□□ -1.37
NEK1-208ENST00000512193 EML6Q6ZMW3 1958 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 A0A087X0K7 114 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 PPBPP02775 128 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 Q0VG73 95 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 DIAPH2-AS1Q14236 149 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 RASL11AQ6T310 242 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 C11orf53Q8IXP5 236 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 C18orf32Q8TCD1 76 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 DUX5Q96PT3 197 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 NXT2Q9NPJ8 142 aaKnown RBP6.51□□□□□ -1.37
NEK1-208ENST00000512193 TPSG1Q9NRR2 321 aa6.51□□□□□ -1.37
NEK1-208ENST00000512193 SYS1-DBNDD2H3BUS1 97 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 HAX1O00165 279 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 SNCGO76070 127 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 ARMS2P0C7Q2 107 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 COX6B1P14854 86 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 AMMECR1LQ6DCA0 310 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 Q6ZSR3 168 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 Q6ZWC4 215 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 AMN1Q8IY45 258 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 JMJD8Q96S16 334 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 MRPL27Q9P0M9 148 aaKnown RBP6.5□□□□□ -1.37
NEK1-208ENST00000512193 LSM4Q9Y4Z0 139 aaKnown RBP6.5□□□□□ -1.37
NEK1-208ENST00000512193 PSMB11A5LHX3 300 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 SMKR1H3BMG3 65 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 IGLV1-44P01699 117 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 COX6CP09669 75 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 SMIM12Q96EX1 92 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 V9GYV3 84 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 DNAH12Q6ZR08 3092 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 IGF2RP11717 2491 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 TRAV40A0A0B4J280 105 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 A0A1B0GWB2 263 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 TOMM40O96008 361 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 TGFAP01135 160 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 CD7P09564 240 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 NDPQ00604 133 aa6.5□□□□□ -1.37
NEK1-208ENST00000512193 GEMIN7Q9H840 131 aaKnown RBP6.5□□□□□ -1.37
NEK1-208ENST00000512193 UTRNP46939 3433 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms