RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CXCL1P09341 107 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 PPIAL4FP0DN26 164 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 CALCBP10092 127 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 S100A11P31949 105 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 FCGR2BP31994 310 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 FCGR2CP31995 323 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 RPL31P62899 125 aaKnown RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 TBR1Q16650 682 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 NMSQ5H8A3 153 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC25A53Q5H9E4 307 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 SFTA2Q6UW10 78 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 BHLHA15Q7RTS1 189 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 C1QL2Q7Z5L3 287 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM256Q8N2U0 113 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR5AN1Q8NGI8 311 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR51E1Q8TCB6 317 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 MRAPQ8TCY5 172 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 RNASEH2CQ8TDP1 164 aaKnown RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 ITLN2Q8WWU7 325 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 TAF15Q92804 592 aaKnown RBP eCLIP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 PHYHIPLQ96FC7 376 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 MRGPRX4Q96LA9 322 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF48Q96MX3 618 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 GSX2Q9BZM3 304 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 LAT2Q9GZY6 243 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 DEFB127Q9H1M4 99 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 LYRM4Q9HD34 91 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 HSPB7Q9UBY9 170 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 PRO0461Q9UI25 63 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 PPIAL4AQ9Y536 164 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 IGKV1OR2-108A0A075B7D4 117 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM235A6NFC5 223 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC17A2O00624 439 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 PEX7O00628 323 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 RAB29O14966 203 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 MRPS12O15235 138 aaKnown RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 KBTBD11O94819 623 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 CYB5R3P00387 301 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 IGHG3P01860 377 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 CTLA4P16410 223 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 APOBEC3AP31941 199 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMEM95Q3KNT9 176 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 C3orf36Q3SXR2 165 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 UFSP1Q6NVU6 142 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 LHFPL2Q6ZUX7 228 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 STHQ8IWL8 128 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 BAP18Q8IXM2 172 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR11H6Q8NGC7 330 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR52N1Q8NH53 320 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 ADAT3Q96EY9 351 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 IL17FQ96PD4 163 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 MBNL3Q9NUK0 354 aaKnown RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF107Q9UII5 783 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 GPR52Q9Y2T5 361 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 WSB1Q9Y6I7 421 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 SERP1Q9Y6X1 66 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A1W2PPI3 338 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 H3BSH0 61 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 CCSO14618 274 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 NDUFS5O43920 106 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 FGF17O60258 216 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 COX5BP10606 129 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 GNLYP22749 145 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 ATP6V0CP27449 155 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 SRD5A2P31213 254 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 REG1BP48304 166 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 PSG4Q00888 419 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 SYPL1Q16563 259 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 C1orf140Q5VVS0 124 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 TEX36Q5VZQ5 186 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 Q6ZS52 159 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 COX8CQ7Z4L0 72 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 GATD1Q8NB37 220 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR52B4Q8NGK2 314 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 RNF133Q8WVZ7 376 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 PATE1Q8WXA2 126 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 RLN3Q8WXF3 142 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 EEF1AKMT3Q96AZ1 226 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZMYND19Q96E35 227 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 SLC25A2Q9BXI2 301 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 ZNF71Q9NQZ8 489 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 CHTOPQ9Y3Y2 248 aaKnown RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 A0A096LPE4 126 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 FRG2CA6NGY1 282 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 SIRPB1O00241 398 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 TMPRSS2O15393 492 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 NBR2O15453 112 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 UTS2O95399 124 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR2H2O95918 312 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 CBLN1P23435 193 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 CCL18P55774 89 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 PSG9Q00887 426 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 ACSF3Q4G176 576 aaPredicted RBP1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 FAM74A4Q5TZK3 123 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 Q6AWC8 147 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 GLIPR1L1Q6UWM5 242 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 C11orf53Q8IXP5 236 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 POM121L12Q8N7R1 296 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 CYB561A3Q8NBI2 242 aa1.35□□□□□ -2.19
TRAPPC13-211ENST00000512009 OR4D5Q8NGN0 318 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms