RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HPGDSO60760 199 aa12.97□□□□□ -0.33
HMGCS1-206ENST00000511774 B3GALNT1O75752 331 aa12.97□□□□□ -0.33
HMGCS1-206ENST00000511774 TMEM182Q6ZP80 229 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-206ENST00000511774 Q6ZSN1 163 aa12.97□□□□□ -0.33
HMGCS1-206ENST00000511774 TMEM256Q8N2U0 113 aa12.97□□□□□ -0.33
HMGCS1-206ENST00000511774 DTD1Q8TEA8 209 aa12.97□□□□□ -0.33
HMGCS1-206ENST00000511774 VSIG2Q96IQ7 327 aa12.97□□□□□ -0.33
HMGCS1-206ENST00000511774 TRGV9Q99603 122 aa12.97□□□□□ -0.33
HMGCS1-206ENST00000511774 VCX3BQ9H321 246 aa12.97□□□□□ -0.33
HMGCS1-206ENST00000511774 U3KQ87 197 aa12.97□□□□□ -0.33
HMGCS1-206ENST00000511774 A0A096LPF7 62 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 SMIM31A0A1B0GVY4 71 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 GAGE12BA1L429 117 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 GAGE7O76087 117 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 GAGE12FP0CL80 117 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 GAGE12GP0CL81 117 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 GAGE12IP0CL82 117 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 GATA2P23769 480 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 GPX4P36969 197 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 SCGB2B2Q4G0G5 96 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 OR10J6PQ8NGY7 276 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 TMEM263Q8WUH6 116 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 SLC35E1Q96K37 410 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 HSPB7Q9UBY9 170 aa12.96□□□□□ -0.33
HMGCS1-206ENST00000511774 H3BNG1 76 aa12.95□□□□□ -0.34
HMGCS1-206ENST00000511774 SULT1A3P0DMM9 295 aa12.95□□□□□ -0.34
HMGCS1-206ENST00000511774 SULT1A4P0DMN0 295 aa12.95□□□□□ -0.34
HMGCS1-206ENST00000511774 HIST1H1AQ02539 215 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-206ENST00000511774 FAAP20Q6NZ36 180 aa12.95□□□□□ -0.34
HMGCS1-206ENST00000511774 THAP8Q8NA92 274 aa12.95□□□□□ -0.34
HMGCS1-206ENST00000511774 ZNF738Q8NE65 137 aa12.95□□□□□ -0.34
HMGCS1-206ENST00000511774 TMEM56-RWDD3S4R434 201 aa12.95□□□□□ -0.34
HMGCS1-206ENST00000511774 FAM229AH3BQW9 127 aa12.94□□□□□ -0.34
HMGCS1-206ENST00000511774 EREGO14944 169 aa12.94□□□□□ -0.34
HMGCS1-206ENST00000511774 ZNF182P17025 639 aaPredicted RBP12.94□□□□□ -0.34
HMGCS1-206ENST00000511774 RHOBP62745 196 aa12.94□□□□□ -0.34
HMGCS1-206ENST00000511774 ZNF493Q6ZR52 646 aa12.94□□□□□ -0.34
HMGCS1-206ENST00000511774 OR8A1Q8NGG7 326 aa12.94□□□□□ -0.34
HMGCS1-206ENST00000511774 YIPF6Q96EC8 236 aa12.94□□□□□ -0.34
HMGCS1-206ENST00000511774 TMPRSS5Q9H3S3 457 aa12.94□□□□□ -0.34
HMGCS1-206ENST00000511774 MTFP1Q9UDX5 166 aa12.94□□□□□ -0.34
HMGCS1-206ENST00000511774 CRYM-AS1A6NIL9 109 aa12.93□□□□□ -0.34
HMGCS1-206ENST00000511774 SIVA1O15304 175 aa12.93□□□□□ -0.34
HMGCS1-206ENST00000511774 IFNA5P01569 189 aa12.93□□□□□ -0.34
HMGCS1-206ENST00000511774 FGL1Q08830 312 aa12.93□□□□□ -0.34
HMGCS1-206ENST00000511774 OR1B1Q8NGR6 318 aa12.93□□□□□ -0.34
HMGCS1-206ENST00000511774 PARD6GQ9BYG4 376 aaPredicted RBP12.93□□□□□ -0.34
HMGCS1-206ENST00000511774 GABARAPH6UMI1 98 aa12.92□□□□□ -0.34
HMGCS1-206ENST00000511774 GABARAPO95166 117 aa12.92□□□□□ -0.34
HMGCS1-206ENST00000511774 FABP1P07148 127 aa12.92□□□□□ -0.34
HMGCS1-206ENST00000511774 TBPP20226 339 aa12.92□□□□□ -0.34
HMGCS1-206ENST00000511774 OR4D5Q8NGN0 318 aa12.92□□□□□ -0.34
HMGCS1-206ENST00000511774 NXPH4O95158 308 aa12.91□□□□□ -0.34
HMGCS1-206ENST00000511774 TNFAIP8O95379 198 aa12.91□□□□□ -0.34
HMGCS1-206ENST00000511774 RAB3DO95716 219 aa12.91□□□□□ -0.34
HMGCS1-206ENST00000511774 ORM2P19652 201 aa12.91□□□□□ -0.34
HMGCS1-206ENST00000511774 GCSHP23434 173 aa12.91□□□□□ -0.34
HMGCS1-206ENST00000511774 GPR107Q5VW38 600 aa12.91□□□□□ -0.34
HMGCS1-206ENST00000511774 SLC45A2Q9UMX9 530 aa12.91□□□□□ -0.34
HMGCS1-206ENST00000511774 C14orf166Q9Y224 244 aaKnown RBP12.91□□□□□ -0.34
HMGCS1-206ENST00000511774 FAT3Q8TDW7 4589 aa12.9□□□□□ -0.34
HMGCS1-206ENST00000511774 CXCL3P19876 107 aa12.9□□□□□ -0.34
HMGCS1-206ENST00000511774 Q6ZTI0 123 aa12.9□□□□□ -0.34
HMGCS1-206ENST00000511774 LYZL2Q7Z4W2 148 aa12.9□□□□□ -0.34
HMGCS1-206ENST00000511774 TMEM229BQ8NBD8 167 aa12.9□□□□□ -0.34
HMGCS1-206ENST00000511774 IL22RA2Q969J5 263 aa12.9□□□□□ -0.34
HMGCS1-206ENST00000511774 KRTAP29-1A8MX34 341 aaPredicted RBP12.89□□□□□ -0.35
HMGCS1-206ENST00000511774 PRSS46E5RG02 174 aa12.89□□□□□ -0.35
HMGCS1-206ENST00000511774 H3BRN7 92 aa12.89□□□□□ -0.35
HMGCS1-206ENST00000511774 H7BYZ3 331 aa12.89□□□□□ -0.35
HMGCS1-206ENST00000511774 CDKN1BP46527 198 aa12.89□□□□□ -0.35
HMGCS1-206ENST00000511774 NCS1P62166 190 aa12.89□□□□□ -0.35
HMGCS1-206ENST00000511774 SMCO1Q147U7 214 aa12.89□□□□□ -0.35
HMGCS1-206ENST00000511774 STEAP1BQ6NZ63 245 aa12.89□□□□□ -0.35
HMGCS1-206ENST00000511774 TMED4Q7Z7H5 227 aa12.89□□□□□ -0.35
HMGCS1-206ENST00000511774 GPR132Q9UNW8 380 aa12.89□□□□□ -0.35
HMGCS1-206ENST00000511774 RLN2P04090 185 aa12.88□□□□□ -0.35
HMGCS1-206ENST00000511774 IAPPP10997 89 aa12.88□□□□□ -0.35
HMGCS1-206ENST00000511774 CCR6P51684 374 aa12.88□□□□□ -0.35
HMGCS1-206ENST00000511774 PSG3Q16557 428 aa12.88□□□□□ -0.35
HMGCS1-206ENST00000511774 GGNBP1Q5YKI7 109 aa12.88□□□□□ -0.35
HMGCS1-206ENST00000511774 GPR82Q96P67 336 aa12.88□□□□□ -0.35
HMGCS1-206ENST00000511774 PPP1R14DQ9NXH3 145 aa12.88□□□□□ -0.35
HMGCS1-206ENST00000511774 ADAP1O75689 374 aa12.87□□□□□ -0.35
HMGCS1-206ENST00000511774 GFI1BQ5VTD9 330 aa12.87□□□□□ -0.35
HMGCS1-206ENST00000511774 FAM30AQ9NZY2 134 aa12.87□□□□□ -0.35
HMGCS1-206ENST00000511774 FAM25AB3EWG3 89 aa12.86□□□□□ -0.35
HMGCS1-206ENST00000511774 FAM25CB3EWG5 89 aa12.86□□□□□ -0.35
HMGCS1-206ENST00000511774 FAM25GB3EWG6 89 aa12.86□□□□□ -0.35
HMGCS1-206ENST00000511774 ATP5IP56385 69 aaPredicted RBP12.86□□□□□ -0.35
HMGCS1-206ENST00000511774 TAS2R19P59542 299 aa12.86□□□□□ -0.35
HMGCS1-206ENST00000511774 RPUSD4Q96CM3 377 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-206ENST00000511774 SHANK2-AS3Q9BTD1 123 aa12.86□□□□□ -0.35
HMGCS1-206ENST00000511774 TMEM147Q9BVK8 224 aa12.86□□□□□ -0.35
HMGCS1-206ENST00000511774 CACFD1Q9UGQ2 172 aa12.86□□□□□ -0.35
HMGCS1-206ENST00000511774 CFDP00746 253 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-206ENST00000511774 SURF2Q15527 256 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-206ENST00000511774 BPIFCQ8NFQ6 507 aa12.85□□□□□ -0.35
HMGCS1-206ENST00000511774 EXTL2Q9UBQ6 330 aa12.85□□□□□ -0.35
HMGCS1-206ENST00000511774 PAIP2BQ9ULR5 123 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms