RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
SCLT1-209ENST00000511426 BUB3O43684 328 aa11.72□□□□□ -0.53
SCLT1-209ENST00000511426 NDUFB4O95168 129 aa11.72□□□□□ -0.53
SCLT1-209ENST00000511426 KIAA0141Q14154 515 aaPredicted RBP11.72□□□□□ -0.53
SCLT1-209ENST00000511426 C16orf95Q9H693 158 aa11.72□□□□□ -0.53
SCLT1-209ENST00000511426 ESM1Q9NQ30 184 aa11.72□□□□□ -0.53
SCLT1-209ENST00000511426 OTORQ9NRC9 128 aa11.72□□□□□ -0.53
SCLT1-209ENST00000511426 U3KQE9 123 aa11.72□□□□□ -0.53
SCLT1-209ENST00000511426 ITPR2Q14571 2701 aa11.72□□□□□ -0.53
SCLT1-209ENST00000511426 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.53
SCLT1-209ENST00000511426 A0A1W2PS18 150 aa11.71□□□□□ -0.53
SCLT1-209ENST00000511426 S100A9P06702 114 aaKnown RBP11.71□□□□□ -0.53
SCLT1-209ENST00000511426 LGALS1P09382 135 aaKnown RBP11.71□□□□□ -0.53
SCLT1-209ENST00000511426 LEMD1Q68G75 181 aa11.71□□□□□ -0.53
SCLT1-209ENST00000511426 Q6ZSV7 163 aa11.71□□□□□ -0.53
SCLT1-209ENST00000511426 GPHB5Q86YW7 130 aa11.71□□□□□ -0.53
SCLT1-209ENST00000511426 OR8I2Q8N0Y5 310 aa11.71□□□□□ -0.53
SCLT1-209ENST00000511426 FLNAP21333 2647 aaKnown RBP11.71□□□□□ -0.54
SCLT1-209ENST00000511426 A0A087X0K7 114 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 CLPSL1A2RUU4 121 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 PPP5D1E7EU14 171 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 K7EMT4 169 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 TAS2R60P59551 318 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 PSG9Q00887 426 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 FAM106AQ4KMX7 169 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 ATRAIDQ6UW56 229 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 KLHDC1Q8N7A1 406 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 C2CD4CQ8TF44 421 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 SMIM12Q96EX1 92 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 DUX5Q96PT3 197 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 ELOVL1Q9BW60 279 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 TUBA4BQ9H853 241 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 TMEM242Q9NWH2 141 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 ZNF586Q9NXT0 402 aa11.71□□□□□ -0.54
SCLT1-209ENST00000511426 CSMD1Q96PZ7 3565 aa11.7□□□□□ -0.54
SCLT1-209ENST00000511426 HECTD1Q9ULT8 2610 aa11.7□□□□□ -0.54
SCLT1-209ENST00000511426 C7orf77A4D0Y5 90 aa11.7□□□□□ -0.54
SCLT1-209ENST00000511426 IGHV3-11P01762 117 aa11.7□□□□□ -0.54
SCLT1-209ENST00000511426 BMI1P35226 326 aa11.7□□□□□ -0.54
SCLT1-209ENST00000511426 GALR1P47211 349 aa11.7□□□□□ -0.54
SCLT1-209ENST00000511426 ZNF674Q2M3X9 581 aa11.7□□□□□ -0.54
SCLT1-209ENST00000511426 GRAMD2BQ96HH9 432 aa11.7□□□□□ -0.54
SCLT1-209ENST00000511426 Q9H3A6 140 aa11.7□□□□□ -0.54
SCLT1-209ENST00000511426 ZANQ9Y493 2812 aa11.7□□□□□ -0.54
SCLT1-209ENST00000511426 SERTM2A0A1B0GWG4 89 aa11.69□□□□□ -0.54
SCLT1-209ENST00000511426 NDUFA7O95182 113 aa11.69□□□□□ -0.54
SCLT1-209ENST00000511426 RPLP1P05386 114 aaKnown RBP11.69□□□□□ -0.54
SCLT1-209ENST00000511426 CDX1P47902 265 aaPredicted RBP11.69□□□□□ -0.54
SCLT1-209ENST00000511426 CNN1P51911 297 aaKnown RBP11.69□□□□□ -0.54
SCLT1-209ENST00000511426 RANP62826 216 aaKnown RBP11.69□□□□□ -0.54
SCLT1-209ENST00000511426 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
SCLT1-209ENST00000511426 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
SCLT1-209ENST00000511426 CTDSP1Q9GZU7 261 aa11.69□□□□□ -0.54
SCLT1-209ENST00000511426 AAMDCQ9H7C9 122 aa11.69□□□□□ -0.54
SCLT1-209ENST00000511426 DAZ1Q9NQZ3 744 aaKnown RBP11.69□□□□□ -0.54
SCLT1-209ENST00000511426 SMCO4Q9NRQ5 59 aa11.69□□□□□ -0.54
SCLT1-209ENST00000511426 CLEC5AQ9NY25 188 aa11.69□□□□□ -0.54
SCLT1-209ENST00000511426 EPDR1Q9UM22 224 aa11.69□□□□□ -0.54
SCLT1-209ENST00000511426 TEX15Q9BXT5 2789 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 PGPA6NDG6 321 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 CXorf65A6NEN9 183 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 HELTA6NFD8 242 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 PEX7O00628 323 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 TRBV12-3P01733 135 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 ATF4P18848 351 aaPredicted RBP11.68□□□□□ -0.54
SCLT1-209ENST00000511426 AKR1C3P42330 323 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 SMR3AQ99954 134 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 RPS10P5Q9NQ39 176 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 UFC1Q9Y3C8 167 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 CELSR1Q9NYQ6 3014 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 MAP1AP78559 2803 aaPredicted RBP11.68□□□□□ -0.54
SCLT1-209ENST00000511426 IGHV3-35A0A0C4DH35 117 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 TSPAN4O14817 238 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 SCO1O75880 301 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 SLC25A5P05141 298 aaKnown RBP11.68□□□□□ -0.54
SCLT1-209ENST00000511426 RPL35P42766 123 aaKnown RBP11.68□□□□□ -0.54
SCLT1-209ENST00000511426 RPL23P62829 140 aaKnown RBP11.68□□□□□ -0.54
SCLT1-209ENST00000511426 SIGLEC15Q6ZMC9 328 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 CMTM2Q8TAZ6 248 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 SLC50A1Q9BRV3 221 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 C20orf24Q9BUV8 137 aa11.68□□□□□ -0.54
SCLT1-209ENST00000511426 FBLL1A6NHQ2 334 aaKnown RBP11.67□□□□□ -0.54
SCLT1-209ENST00000511426 LGALS9O00182 355 aa11.67□□□□□ -0.54
SCLT1-209ENST00000511426 MT-ND4LP03901 98 aa11.67□□□□□ -0.54
SCLT1-209ENST00000511426 BTN1A1Q13410 526 aa11.67□□□□□ -0.54
SCLT1-209ENST00000511426 RPEL1Q2QD12 228 aa11.67□□□□□ -0.54
SCLT1-209ENST00000511426 REC114Q7Z4M0 266 aa11.67□□□□□ -0.54
SCLT1-209ENST00000511426 LINC01551Q86U37 167 aa11.67□□□□□ -0.54
SCLT1-209ENST00000511426 WIPF2Q8TF74 440 aaPredicted RBP11.67□□□□□ -0.54
SCLT1-209ENST00000511426 ANAPC16Q96DE5 110 aa11.67□□□□□ -0.54
SCLT1-209ENST00000511426 KLF12Q9Y4X4 402 aa11.67□□□□□ -0.54
SCLT1-209ENST00000511426 ZNF469Q96JG9 3925 aaPredicted RBP11.67□□□□□ -0.54
SCLT1-209ENST00000511426 K7EQM0 130 aa11.66□□□□□ -0.54
SCLT1-209ENST00000511426 PPP1R2P9O14990 202 aa11.66□□□□□ -0.54
SCLT1-209ENST00000511426 GNG4P50150 75 aa11.66□□□□□ -0.54
SCLT1-209ENST00000511426 TMEM183BQ1AE95 376 aa11.66□□□□□ -0.54
SCLT1-209ENST00000511426 SAMD13Q5VXD3 122 aa11.66□□□□□ -0.54
SCLT1-209ENST00000511426 C16orf54Q6UWD8 224 aa11.66□□□□□ -0.54
SCLT1-209ENST00000511426 C10orf99Q6UWK7 81 aa11.66□□□□□ -0.54
SCLT1-209ENST00000511426 LCNL1Q6ZST4 164 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms