RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 COX11Q9Y6N1 276 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 IGHV4OR15-8A0A075B7B6 117 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 A0A087WW49 117 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 TRBV7-9A0A0J9YWB2 115 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 IGKV1-16P04430 117 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 BTF3P20290 206 aaKnown RBP7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 C19orf54Q5BKX5 351 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 LURAP1LQ8IV03 231 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 C10orf126Q8N4M7 172 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 THAP8Q8NA92 274 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 COPS9Q8WXC6 57 aa7.56□□□□□ -1.2
POLR2J3-215ENST00000511313 F2Z2F3 143 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 NPCDR1Q9BY65 106 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 IGHV3-35A0A0C4DH35 117 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 HSBP1L1C9JCN9 74 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 MMP23AO75900 390 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 NMBP08949 121 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 PROK1P58294 105 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 ANAPC16Q96DE5 110 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 ANKRD11Q6UB99 2663 aaPredicted RBP7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 FHITP49789 147 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 SUMO1P63165 101 aaKnown RBP7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 CFAP161Q6P656 301 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 NFE4Q86UQ8 179 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 TRAV10A0A0B4J240 114 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 LYRM9A8MSI8 78 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 FOXI3A8MTJ6 420 aaPredicted RBP7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 AREGP15514 252 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 ADIRFQ15847 76 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 C14orf177Q52M58 125 aa7.55□□□□□ -1.2
POLR2J3-215ENST00000511313 EML6Q6ZMW3 1958 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 A0A1W2PPR1 153 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 A8MWV9 139 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 GCHFRP30047 84 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 CDKN1BP46527 198 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 TMEM241Q24JQ0 296 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 PRR27Q6MZM9 219 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 Q8N6K4 173 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 B4DEV8 164 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 FSHBP01225 129 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 PAX2Q02962 417 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 C10orf55Q5SWW7 151 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 UQCC3Q6UW78 93 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 TP53TG1Q9Y2A0 90 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 ZNF462Q96JM2 2506 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 SHANK1Q9Y566 2161 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 SLURP1P55000 103 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 SPRNQ5BIV9 151 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 SMIM12Q96EX1 92 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 KIR2DL4Q99706 377 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 CADP27708 2225 aa7.54□□□□□ -1.2
POLR2J3-215ENST00000511313 A0A087WX48 190 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 S100A2P29034 98 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 TMEM14EPQ6UXP3 125 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 Q6ZWC4 215 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 AGMATQ9BSE5 352 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 NCKAP5O14513 1909 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 C9JCJ5 164 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 EMP1P54849 157 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 MRPL23Q16540 153 aaKnown RBP7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 RNF183Q96D59 192 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 DPH3Q96FX2 82 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 SMR3AQ99954 134 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 CTDSP1Q9GZU7 261 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 IGHV3-49A0A0A0MS15 119 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 A8MWP6 167 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 F5H768 121 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 IGLL1P15814 213 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 KRTAP24-1Q3LI83 254 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 ODF3Q96PU9 254 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 NAT8Q9UHE5 227 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 YTHDF2Q9Y5A9 579 aaKnown RBP7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 DOPEY1Q5JWR5 2465 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 A0A087WWC5 75 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 A0A1B0GV50 99 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 RBAKDNA6NC62 111 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 FAM74A7A6NL05 159 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 IGKV3-20P01619 116 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 MGPP08493 103 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 ATP6V0CP27449 155 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 RNASE4P34096 147 aaKnown RBP7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 OR2D3Q8NGH3 330 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 DPH3P1Q9H4G8 78 aa7.53□□□□□ -1.2
POLR2J3-215ENST00000511313 DYSFO75923 2080 aa7.52□□□□□ -1.2
POLR2J3-215ENST00000511313 CD7P09564 240 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 C11orf45Q8TAV5 145 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 IGF2BP2-AS1Q96M15 143 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 Q9H3A6 140 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 FASNP49327 2511 aaKnown RBP7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 PSMB8P28062 276 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 ZNF56Q15929 161 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 IGLC7A0M8Q6 106 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 PPP5D1E7EU14 171 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 GCGP01275 180 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 CRISP2P16562 243 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 SVBPQ8N300 66 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 OR10W1Q8NGF6 305 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 TVP23CQ96ET8 276 aa7.52□□□□□ -1.21
POLR2J3-215ENST00000511313 IGHV3OR16-13A0A075B7E8 117 aa7.51□□□□□ -1.21
POLR2J3-215ENST00000511313 IGHV3-74A0A0B4J1X5 117 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms