RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 SUB1P53999 127 aaKnown RBP eCLIP3.93□□□□□ -1.78
NUP54-210ENST00000510884 MTPNP58546 118 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 KRTDAPP60985 99 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 MRPS36P82909 103 aaKnown RBP3.93□□□□□ -1.78
NUP54-210ENST00000510884 EBI3Q14213 229 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 ECSCRQ19T08 205 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 ZNF506Q5JVG8 444 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 C22orf39Q6P5X5 142 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 TMEM136Q6ZRR5 245 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 BPIFA4PQ86YQ2 179 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 DRAM1Q8N682 238 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 C15orf53Q8NAA6 179 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 OR2T10Q8NGZ9 312 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 MYOZ3Q8TDC0 251 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 SRSF12Q8WXF0 261 aaKnown RBP3.93□□□□□ -1.78
NUP54-210ENST00000510884 AQP3Q92482 292 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 PRELID3AQ96N28 172 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 NMNAT3Q96T66 252 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 TM2D1Q9BX74 207 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 NMES1Q9C002 83 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 CST11Q9H112 138 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 LSM2Q9Y333 95 aaKnown RBP3.93□□□□□ -1.78
NUP54-210ENST00000510884 DNAH14Q0VDD8 3507 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 FAM208AQ9UK61 1670 aaKnown RBP3.93□□□□□ -1.78
NUP54-210ENST00000510884 ARFGEF1Q9Y6D6 1849 aa3.93□□□□□ -1.78
NUP54-210ENST00000510884 ANK1P16157 1881 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 DOCK5Q9H7D0 1870 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 NCOR1O75376 2440 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 NCKAP5O14513 1909 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 C5P01031 1676 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 SMIM26A0A096LP01 95 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 TRBV7-7A0A0K0K1E9 115 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 IZUMO1RA6ND01 250 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 ZFP92A6NM28 416 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 NCBP2LA6PVI3 153 aaKnown RBP3.92□□□□□ -1.78
NUP54-210ENST00000510884 A8MWV9 139 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 C9JQL5 133 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 ZNF737O75373 536 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 NUDT14O95848 222 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 SOD1P00441 154 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 CD3DP04234 171 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 CD59P13987 128 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 VDAC1P21796 283 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 FOXF1Q12946 379 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 LAGE3Q14657 143 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 LINC00303Q3SY05 128 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 RFLNAQ6ZTI6 216 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 TMEM179BQ7Z7N9 219 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 LSM10Q969L4 123 aaKnown RBP3.92□□□□□ -1.78
NUP54-210ENST00000510884 SLC25A44Q96H78 314 aaPredicted RBP3.92□□□□□ -1.78
NUP54-210ENST00000510884 KCNS1Q96KK3 526 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 C4orf45Q96LM5 186 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 SLC39A9Q9NUM3 307 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 RPUSD1Q9UJJ7 312 aaKnown RBP3.92□□□□□ -1.78
NUP54-210ENST00000510884 NEUROG3Q9Y4Z2 214 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 PXMP4Q9Y6I8 212 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 SERP1Q9Y6X1 66 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 TPRP12270 2363 aaKnown RBP3.92□□□□□ -1.78
NUP54-210ENST00000510884 TRIP11Q15643 1979 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 DSPPQ9NZW4 1301 aa3.92□□□□□ -1.78
NUP54-210ENST00000510884 BTAF1O14981 1849 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 LYPD3O95274 346 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 GYPBP06028 91 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 SRP19P09132 144 aaKnown RBP3.91□□□□□ -1.78
NUP54-210ENST00000510884 SMIM13P0DJ93 91 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 COX7CP15954 63 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 CTLA4P16410 223 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 CRISP2P16562 243 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 FKBP2P26885 142 aaKnown RBP3.91□□□□□ -1.78
NUP54-210ENST00000510884 SLC25A1P53007 311 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 NPC2P61916 151 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 FKBP1AP62942 108 aaKnown RBP3.91□□□□□ -1.78
NUP54-210ENST00000510884 QRFPP83859 136 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 CHD3Q12873 2000 aaKnown RBP3.91□□□□□ -1.78
NUP54-210ENST00000510884 DOCK1Q14185 1865 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 PDCD11Q14690 1871 aaKnown RBP3.91□□□□□ -1.78
NUP54-210ENST00000510884 CDK5R1Q15078 307 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 ETDBQ3ZM63 59 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 DGAT2L6Q6ZPD8 337 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 TEN1Q86WV5 123 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 TIAM2Q8IVF5 1701 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 MMD2Q8IY49 270 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 Q8N976 141 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 OR10G2Q8NGC3 310 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 OR8B3Q8NGG8 313 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 OR2A1Q8NGT9 310 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 PPP1R1CQ8WVI7 109 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 ATXN7L3BQ96GX2 97 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 FAM218AQ96MZ4 157 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 MGST2Q99735 147 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 C20orf78Q9BR46 151 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 SCRT1Q9BWW7 348 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 GNB1LQ9BYB4 327 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 SRXN1Q9BYN0 137 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 AGPAT4-IT1Q9H0P7 198 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 MANBALQ9NQG1 85 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 DAZ1Q9NQZ3 744 aaKnown RBP3.91□□□□□ -1.78
NUP54-210ENST00000510884 CYTL1Q9NRR1 136 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 TAAR3PQ9P1P4 343 aa3.91□□□□□ -1.78
NUP54-210ENST00000510884 USP24Q9UPU5 2620 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms