RNA–Protein interactions for RNA: ENST00000509454.5

LIMCH1-210, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-210ENST00000509454 MAP6D1Q9H9H5 199 aa8.51□□□□□ -1.05
LIMCH1-210ENST00000509454 DNAJC4Q9NNZ3 241 aa8.51□□□□□ -1.05
LIMCH1-210ENST00000509454 KCNIP2Q9NS61 270 aa8.51□□□□□ -1.05
LIMCH1-210ENST00000509454 ELOA3CA0A087WX78 387 aaPredicted RBP8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 RPL35AP18077 110 aaKnown RBP8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 RPL7P18124 248 aaKnown RBP8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 ID1P41134 155 aa8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 ZNF124Q15973 351 aa8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 PSMG4Q5JS54 123 aa8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 PATE2Q6UY27 113 aa8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 LINC00052Q96N35 136 aa8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 GPR82Q96P67 336 aa8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 C19orf73Q9NVV2 129 aa8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 RNF24Q9Y225 148 aa8.5□□□□□ -1.05
LIMCH1-210ENST00000509454 RBMY1BA6NDE4 496 aaKnown RBP8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 RBMY1EA6NEQ0 496 aaKnown RBP8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 A8MZ25 164 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 RBMY1DP0C7P1 496 aaKnown RBP8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 SBSPONQ8IVN8 264 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 LRRC20Q8TCA0 184 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 DCANP1Q8TF63 244 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 C16orf92Q96LL3 132 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 AQP10Q96PS8 301 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 WFDC1Q9HC57 220 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 LOC102724200A0A096LPH7 203 aaPredicted RBP8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 ARPC5O15511 151 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 TMEM37Q8WXS4 190 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 CITED4Q96RK1 184 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 ZMAT4Q9H898 229 aa8.49□□□□□ -1.05
LIMCH1-210ENST00000509454 KNCNA6PVL3 124 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 SNRPCP09234 159 aaKnown RBP8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 NHLRC4P0CG21 123 aaPredicted RBP8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 MEOX2P50222 304 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 ZNF266Q14584 549 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 HAGHQ16775 308 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 GCSAMLQ5JQS6 135 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 ACTL10Q5JWF8 245 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 FFAR4Q5NUL3 377 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 Q6ZNX1 250 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 STHQ8IWL8 128 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 HSD17B11Q8NBQ5 300 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 FAM110AQ9BQ89 295 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 TNFSF18Q9UNG2 199 aa8.48□□□□□ -1.05
LIMCH1-210ENST00000509454 BORCS7-ASMTA0A0B4J1R7 106 aa8.47□□□□□ -1.05
LIMCH1-210ENST00000509454 TRAV5A0A0B4J249 113 aa8.47□□□□□ -1.05
LIMCH1-210ENST00000509454 APOC4P55056 127 aa8.47□□□□□ -1.05
LIMCH1-210ENST00000509454 FAM78BQ5VT40 261 aa8.47□□□□□ -1.05
LIMCH1-210ENST00000509454 SAMD13Q5VXD3 122 aa8.47□□□□□ -1.05
LIMCH1-210ENST00000509454 MORN5Q5VZ52 161 aa8.47□□□□□ -1.05
LIMCH1-210ENST00000509454 BPIFA4PQ86YQ2 179 aa8.47□□□□□ -1.05
LIMCH1-210ENST00000509454 GATAD1Q8WUU5 269 aa8.47□□□□□ -1.05
LIMCH1-210ENST00000509454 MFFQ9GZY8 342 aa8.47□□□□□ -1.05
LIMCH1-210ENST00000509454 RNF222A6NCQ9 220 aa8.46□□□□□ -1.05
LIMCH1-210ENST00000509454 H3BTX0 84 aa8.46□□□□□ -1.05
LIMCH1-210ENST00000509454 PSMB3P49720 205 aa8.46□□□□□ -1.05
LIMCH1-210ENST00000509454 IGFL4Q6B9Z1 124 aa8.46□□□□□ -1.05
LIMCH1-210ENST00000509454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.46□□□□□ -1.05
LIMCH1-210ENST00000509454 PARD6GQ9BYG4 376 aaPredicted RBP8.46□□□□□ -1.05
LIMCH1-210ENST00000509454 G3V3Q6 166 aa8.45□□□□□ -1.06
LIMCH1-210ENST00000509454 ISLRO14498 428 aa8.45□□□□□ -1.06
LIMCH1-210ENST00000509454 SPATA25Q9BR10 227 aa8.45□□□□□ -1.06
LIMCH1-210ENST00000509454 RETNQ9HD89 108 aa8.45□□□□□ -1.06
LIMCH1-210ENST00000509454 RFNGQ9Y644 331 aa8.45□□□□□ -1.06
LIMCH1-210ENST00000509454 ACOT6Q3I5F7 207 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 SPATA31B1PQ5VZV4 182 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 RPL7L1Q6DKI1 246 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 MIR17HGQ75NE6 70 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 RNF182Q8N6D2 247 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 ZNF738Q8NE65 137 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 SEPSECSQ9HD40 501 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 RPRMQ9NS64 109 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 U3KQK5 164 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 PRKDCP78527 4128 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 A0A087X0K7 114 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 SOCS3O14543 225 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 IGKV3-20P01619 116 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 DEFB1P60022 68 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 RHOBP62745 196 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 EBLN2Q6P2I7 272 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 LCN15Q6UWW0 184 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 LINC00322Q6ZN03 302 aaPredicted RBP8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 AKAP14Q86UN6 197 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 BLNKQ8WV28 456 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 C20orf173Q96LM9 149 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 RCHY1Q96PM5 261 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 MRPL32Q9BYC8 188 aaKnown RBP8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 FUT9Q9Y231 359 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 TIMM9Q9Y5J7 89 aa8.44□□□□□ -1.06
LIMCH1-210ENST00000509454 A0A1W2PPV4 95 aa8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 TAAR5O14804 337 aa8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 OR7C2O60412 319 aa8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 CA1P00915 261 aaPredicted RBP8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 PYYP10082 97 aa8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 ATP6V0CP27449 155 aa8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 DEFB135Q30KP9 77 aa8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 FAM122CQ6P4D5 195 aa8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 OR11H4Q8NGC9 324 aa8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 OR4B1Q8NGF8 309 aa8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 C17orf77Q96MU5 243 aa8.43□□□□□ -1.06
LIMCH1-210ENST00000509454 TM2D3Q9BRN9 247 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms