RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 LINC00854A0A1B0GVQ3 168 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 HYPMO75409 117 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 IFNA21P01568 189 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 IL5P05113 134 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 P0DMU3 169 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 FAM231AP0DMU4 169 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 FAM231CP0DMU5 169 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 S100A7P31151 101 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 INPP1P49441 399 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 PLP1P60201 277 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 OXA1LQ15070 435 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 IGF2BP2-AS1Q96M15 143 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 C7orf50Q9BRJ6 194 aaKnown RBP8.9□□□□□ -0.98
PDPN-208ENST00000509009 NIPSNAP3BQ9BS92 247 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 SHANK2-AS3Q9BTD1 123 aa8.9□□□□□ -0.98
PDPN-208ENST00000509009 SLC25A39Q9BZJ4 359 aaPredicted RBP8.9□□□□□ -0.98
PDPN-208ENST00000509009 LOC102723971A0A1B0GUV8 181 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 SMCO3A2RU48 225 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 H3BRN7 92 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 CCNKO75909 580 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 DUSP14O95147 198 aaKnown RBP8.89□□□□□ -0.99
PDPN-208ENST00000509009 HBE1P02100 147 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 ANXA7P20073 488 aaKnown RBP8.89□□□□□ -0.99
PDPN-208ENST00000509009 BTCP35070 178 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 RRN3P1Q2M238 152 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 TRIQKQ629K1 86 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 TMEM14EPQ6UXP3 125 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 OR11H7Q8NGC8 314 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 FAM210BQ96KR6 192 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 NPVFQ9HCQ7 196 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 HIGD1AQ9Y241 93 aa8.89□□□□□ -0.99
PDPN-208ENST00000509009 DNAH17Q9UFH2 4485 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 TEX48A0A1B0GUV7 120 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 CRXO43186 299 aaPredicted RBP8.88□□□□□ -0.99
PDPN-208ENST00000509009 SSSCA1O60232 199 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 PRM2P04554 102 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 METTL15P1P0C7V9 234 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 RPL7P18124 248 aaKnown RBP8.88□□□□□ -0.99
PDPN-208ENST00000509009 CNN1P51911 297 aaKnown RBP8.88□□□□□ -0.99
PDPN-208ENST00000509009 RAP2BP61225 183 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 RRAS2P62070 204 aaPredicted RBP8.88□□□□□ -0.99
PDPN-208ENST00000509009 SELENOTP62341 195 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 DLK1P80370 383 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 FGL1Q08830 312 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 C4orf46Q504U0 113 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 PATE2Q6UY27 113 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 RNF182Q8N6D2 247 aa8.88□□□□□ -0.99
PDPN-208ENST00000509009 YTHDF2Q9Y5A9 579 aaKnown RBP8.88□□□□□ -0.99
PDPN-208ENST00000509009 CENPXA8MT69 81 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 ZNF705GA8MUZ8 300 aaPredicted RBP8.87□□□□□ -0.99
PDPN-208ENST00000509009 FNDC10F2Z333 226 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 K7EPK0 472 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 M0R2Z0 102 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 OR5G3P0C626 314 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 LINC00869P0C866 280 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 TAS2R30P59541 319 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 IAH1Q2TAA2 248 aaPredicted RBP8.87□□□□□ -0.99
PDPN-208ENST00000509009 LINC00336Q6ZUF6 198 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 ZBTB8BQ8NAP8 495 aaPredicted RBP8.87□□□□□ -0.99
PDPN-208ENST00000509009 MITD1Q8WV92 249 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 TMEM208Q9BTX3 173 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 KRTAP17-1Q9BYP8 105 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 GSKIPQ9P0R6 139 aa8.87□□□□□ -0.99
PDPN-208ENST00000509009 M0R2N4 97 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 PLA2G10O15496 165 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 TSC22D2O75157 780 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 HTN3P15516 51 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 CXCL3P19876 107 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 ARL16Q0P5N6 197 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 PSG3Q16557 428 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 SPINK13Q1W4C9 94 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 CNPY1Q3B7I2 92 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 TEPPQ6URK8 271 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 OR10P1Q8NGE3 313 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 UHRF2Q96PU4 802 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 ARL6Q9H0F7 186 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 BATF3Q9NR55 127 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 HERC2O95714 4834 aa8.86□□□□□ -0.99
PDPN-208ENST00000509009 A0A087X0K7 114 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 C7orf66A4D0T2 115 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 RTL8CO15255 209 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 SCGB1D2O95969 90 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 MBPP02686 304 aaPredicted RBP8.85□□□□□ -0.99
PDPN-208ENST00000509009 IL7P13232 177 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 B2MP61769 119 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 DAD1P61803 113 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 LGALS9BQ3B8N2 356 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 S100A7AQ86SG5 101 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 ZNF738Q8NE65 137 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 OR8A1Q8NGG7 326 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 MGAT4CQ9UBM8 478 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 RCL1Q9Y2P8 373 aaKnown RBP8.85□□□□□ -0.99
PDPN-208ENST00000509009 DNAH2Q9P225 4427 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 FAT2Q9NYQ8 4349 aa8.85□□□□□ -0.99
PDPN-208ENST00000509009 A0A1B0GVY2 172 aa8.84□□□□□ -0.99
PDPN-208ENST00000509009 GOSR2O14653 212 aa8.84□□□□□ -0.99
PDPN-208ENST00000509009 AGPAT2O15120 278 aa8.84□□□□□ -0.99
PDPN-208ENST00000509009 MRPS12O15235 138 aaKnown RBP8.84□□□□□ -0.99
PDPN-208ENST00000509009 INSP01308 110 aa8.84□□□□□ -0.99
PDPN-208ENST00000509009 AZU1P20160 251 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms