RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 K7EPK0 472 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 TSC22D2O75157 780 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 CCNKO75909 580 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 FXYD7P58549 80 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 SELENOTP62341 195 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 PSG9Q00887 426 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 IAH1Q2TAA2 248 aaPredicted RBP13.42□□□□□ -0.26
FGFR3-209ENST00000507588 FAM78BQ5VT40 261 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 GSG1LQ6UXU4 331 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 ZBTB8BQ8NAP8 495 aaPredicted RBP13.42□□□□□ -0.26
FGFR3-209ENST00000507588 SHANK2-AS3Q9BTD1 123 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 SCRT1Q9BWW7 348 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 SLC25A39Q9BZJ4 359 aaPredicted RBP13.42□□□□□ -0.26
FGFR3-209ENST00000507588 C20orf85Q9H1P6 137 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 DOK5Q9P104 306 aa13.42□□□□□ -0.26
FGFR3-209ENST00000507588 IL5P05113 134 aa13.41□□□□□ -0.26
FGFR3-209ENST00000507588 LINC00869P0C866 280 aa13.41□□□□□ -0.26
FGFR3-209ENST00000507588 RSG1Q9BU20 258 aa13.41□□□□□ -0.26
FGFR3-209ENST00000507588 NDUFA13Q9P0J0 144 aa13.41□□□□□ -0.26
FGFR3-209ENST00000507588 HIGD1AQ9Y241 93 aa13.41□□□□□ -0.26
FGFR3-209ENST00000507588 RFNGQ9Y644 331 aa13.41□□□□□ -0.26
FGFR3-209ENST00000507588 PLA2G10O15496 165 aa13.4□□□□□ -0.26
FGFR3-209ENST00000507588 SCGB1D2O95969 90 aa13.4□□□□□ -0.26
FGFR3-209ENST00000507588 METTL15P1P0C7V9 234 aa13.4□□□□□ -0.26
FGFR3-209ENST00000507588 RAP2BP61225 183 aa13.4□□□□□ -0.26
FGFR3-209ENST00000507588 AMTNQ6UX39 209 aa13.4□□□□□ -0.26
FGFR3-209ENST00000507588 OR10P1Q8NGE3 313 aa13.4□□□□□ -0.26
FGFR3-209ENST00000507588 NPVFQ9HCQ7 196 aa13.4□□□□□ -0.26
FGFR3-209ENST00000507588 DEFB131BA0A096LNP1 70 aa13.39□□□□□ -0.27
FGFR3-209ENST00000507588 TEX48A0A1B0GUV7 120 aa13.39□□□□□ -0.27
FGFR3-209ENST00000507588 LYRM1O43325 122 aa13.39□□□□□ -0.27
FGFR3-209ENST00000507588 SPART-AS1P0CW21 52 aa13.39□□□□□ -0.27
FGFR3-209ENST00000507588 RPL7P18124 248 aaKnown RBP13.39□□□□□ -0.27
FGFR3-209ENST00000507588 RRAS2P62070 204 aaPredicted RBP13.39□□□□□ -0.27
FGFR3-209ENST00000507588 ZNF767PQ75MW2 155 aa13.39□□□□□ -0.27
FGFR3-209ENST00000507588 C1orf158Q8N1D5 194 aa13.39□□□□□ -0.27
FGFR3-209ENST00000507588 MGAT4CQ9UBM8 478 aa13.39□□□□□ -0.27
FGFR3-209ENST00000507588 GOLT1BQ9Y3E0 138 aa13.39□□□□□ -0.27
FGFR3-209ENST00000507588 FAT2Q9NYQ8 4349 aa13.38□□□□□ -0.27
FGFR3-209ENST00000507588 IGHV3OR16-12A0A075B7B8 117 aa13.38□□□□□ -0.27
FGFR3-209ENST00000507588 A0A087X0K7 114 aa13.38□□□□□ -0.27
FGFR3-209ENST00000507588 TRAV8-2A0A0B4J237 113 aa13.38□□□□□ -0.27
FGFR3-209ENST00000507588 HYPMO75409 117 aa13.38□□□□□ -0.27
FGFR3-209ENST00000507588 TEPPQ6URK8 271 aa13.38□□□□□ -0.27
FGFR3-209ENST00000507588 S100A7AQ86SG5 101 aa13.38□□□□□ -0.27
FGFR3-209ENST00000507588 DNAH2Q9P225 4427 aa13.38□□□□□ -0.27
FGFR3-209ENST00000507588 C7orf66A4D0T2 115 aa13.37□□□□□ -0.27
FGFR3-209ENST00000507588 MBPP02686 304 aaPredicted RBP13.37□□□□□ -0.27
FGFR3-209ENST00000507588 IGF2BP2-AS1Q96M15 143 aa13.37□□□□□ -0.27
FGFR3-209ENST00000507588 UHRF2Q96PU4 802 aa13.37□□□□□ -0.27
FGFR3-209ENST00000507588 GGACTQ9BVM4 153 aa13.37□□□□□ -0.27
FGFR3-209ENST00000507588 DKK2Q9UBU2 259 aa13.37□□□□□ -0.27
FGFR3-209ENST00000507588 DUSP14O95147 198 aaKnown RBP13.36□□□□□ -0.27
FGFR3-209ENST00000507588 HBE1P02100 147 aa13.36□□□□□ -0.27
FGFR3-209ENST00000507588 TCRBP04435 133 aa13.36□□□□□ -0.27
FGFR3-209ENST00000507588 OR5G3P0C626 314 aa13.36□□□□□ -0.27
FGFR3-209ENST00000507588 CNN1P51911 297 aaKnown RBP13.36□□□□□ -0.27
FGFR3-209ENST00000507588 SLC38A11Q08AI6 406 aa13.36□□□□□ -0.27
FGFR3-209ENST00000507588 PXDC1Q5TGL8 231 aa13.36□□□□□ -0.27
FGFR3-209ENST00000507588 ZNF546Q86UE3 836 aa13.36□□□□□ -0.27
FGFR3-209ENST00000507588 OR11H7Q8NGC8 314 aa13.36□□□□□ -0.27
FGFR3-209ENST00000507588 GSKIPQ9P0R6 139 aa13.36□□□□□ -0.27
FGFR3-209ENST00000507588 RNF24Q9Y225 148 aa13.36□□□□□ -0.27
FGFR3-209ENST00000507588 CCSO14618 274 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 ARL16Q0P5N6 197 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 OXA1LQ15070 435 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 FAM222AQ5U5X8 452 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 RNF182Q8N6D2 247 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 NDUFAF3Q9BU61 184 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 CCDC32Q9BV29 185 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 ARL6Q9H0F7 186 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 ARV1Q9H2C2 271 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 NUDT15Q9NV35 164 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 DNAH17Q9UFH2 4485 aa13.35□□□□□ -0.27
FGFR3-209ENST00000507588 LOC102723971A0A1B0GUV8 181 aa13.34□□□□□ -0.27
FGFR3-209ENST00000507588 MRPS12O15235 138 aaKnown RBP13.34□□□□□ -0.27
FGFR3-209ENST00000507588 EMP1P54849 157 aa13.34□□□□□ -0.27
FGFR3-209ENST00000507588 FGL1Q08830 312 aa13.34□□□□□ -0.27
FGFR3-209ENST00000507588 RRN3P1Q2M238 152 aa13.34□□□□□ -0.27
FGFR3-209ENST00000507588 IGFL4Q6B9Z1 124 aa13.34□□□□□ -0.27
FGFR3-209ENST00000507588 PATE2Q6UY27 113 aa13.34□□□□□ -0.27
FGFR3-209ENST00000507588 ZNF431Q8TF32 576 aaPredicted RBP13.34□□□□□ -0.27
FGFR3-209ENST00000507588 NIPSNAP3BQ9BS92 247 aa13.34□□□□□ -0.27
FGFR3-209ENST00000507588 NACAE9PAV3 2078 aa13.34□□□□□ -0.27
FGFR3-209ENST00000507588 TRAV6A0A075B6T7 132 aa13.33□□□□□ -0.28
FGFR3-209ENST00000507588 AGPAT2O15120 278 aa13.33□□□□□ -0.28
FGFR3-209ENST00000507588 CRXO43186 299 aaPredicted RBP13.33□□□□□ -0.28
FGFR3-209ENST00000507588 INSP01308 110 aa13.33□□□□□ -0.28
FGFR3-209ENST00000507588 CXCL2P19875 107 aa13.33□□□□□ -0.28
FGFR3-209ENST00000507588 CXCL3P19876 107 aa13.33□□□□□ -0.28
FGFR3-209ENST00000507588 ZNF846Q147U1 533 aa13.33□□□□□ -0.28
FGFR3-209ENST00000507588 LINC00299Q6ZSB3 139 aa13.33□□□□□ -0.28
FGFR3-209ENST00000507588 ZNF738Q8NE65 137 aa13.33□□□□□ -0.28
FGFR3-209ENST00000507588 FAM210BQ96KR6 192 aa13.33□□□□□ -0.28
FGFR3-209ENST00000507588 C11orf1Q9H5F2 150 aa13.33□□□□□ -0.28
FGFR3-209ENST00000507588 YTHDF2Q9Y5A9 579 aaKnown RBP13.33□□□□□ -0.28
FGFR3-209ENST00000507588 M0R2Z0 102 aa13.32□□□□□ -0.28
FGFR3-209ENST00000507588 GOSR2O14653 212 aa13.32□□□□□ -0.28
FGFR3-209ENST00000507588 P0DMU3 169 aa13.32□□□□□ -0.28
FGFR3-209ENST00000507588 FAM231AP0DMU4 169 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms