RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 WDR61Q9GZS3 305 aaKnown RBP13.43□□□□□ -0.26
NPHP4-210ENST00000506941 WFDC1Q9HC57 220 aa13.43□□□□□ -0.26
NPHP4-210ENST00000506941 SLC39A9Q9NUM3 307 aa13.43□□□□□ -0.26
NPHP4-210ENST00000506941 PXMP4Q9Y6I8 212 aa13.43□□□□□ -0.26
NPHP4-210ENST00000506941 GALR1P47211 349 aa13.42□□□□□ -0.26
NPHP4-210ENST00000506941 B2MP61769 119 aa13.42□□□□□ -0.26
NPHP4-210ENST00000506941 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
NPHP4-210ENST00000506941 OR2T35Q8NGX2 323 aa13.42□□□□□ -0.26
NPHP4-210ENST00000506941 DNAH7Q8WXX0 4024 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 RPL35AP18077 110 aaKnown RBP13.41□□□□□ -0.26
NPHP4-210ENST00000506941 S100A7P31151 101 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 FGL1Q08830 312 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 PSMG4Q5JS54 123 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 C10orf113Q5VZT2 155 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 GPR82Q96P67 336 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 AQP10Q96PS8 301 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 RSG1Q9BU20 258 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 RETNQ9HD89 108 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 DNAJC4Q9NNZ3 241 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 U3KQK5 164 aa13.41□□□□□ -0.26
NPHP4-210ENST00000506941 ELOA3CA0A087WX78 387 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-210ENST00000506941 MRPS12O15235 138 aaKnown RBP13.4□□□□□ -0.26
NPHP4-210ENST00000506941 GCSAMLQ5JQS6 135 aa13.4□□□□□ -0.26
NPHP4-210ENST00000506941 Q6ZRG5 221 aa13.4□□□□□ -0.26
NPHP4-210ENST00000506941 RCHY1Q96PM5 261 aa13.4□□□□□ -0.26
NPHP4-210ENST00000506941 SEPSECSQ9HD40 501 aaKnown RBP13.4□□□□□ -0.26
NPHP4-210ENST00000506941 KNCNA6PVL3 124 aa13.39□□□□□ -0.27
NPHP4-210ENST00000506941 RPL7P18124 248 aaKnown RBP13.39□□□□□ -0.27
NPHP4-210ENST00000506941 PSMB3P49720 205 aa13.39□□□□□ -0.27
NPHP4-210ENST00000506941 SNRPD3P62318 126 aaKnown RBP13.39□□□□□ -0.27
NPHP4-210ENST00000506941 S100A7AQ86SG5 101 aa13.39□□□□□ -0.27
NPHP4-210ENST00000506941 OR1L4Q8NGR5 311 aa13.39□□□□□ -0.27
NPHP4-210ENST00000506941 SPATA25Q9BR10 227 aa13.39□□□□□ -0.27
NPHP4-210ENST00000506941 ZMAT4Q9H898 229 aa13.39□□□□□ -0.27
NPHP4-210ENST00000506941 FXYD6-FXYD2A0A087WZ82 144 aa13.38□□□□□ -0.27
NPHP4-210ENST00000506941 RNF222A6NCQ9 220 aa13.38□□□□□ -0.27
NPHP4-210ENST00000506941 DEFB1P60022 68 aa13.38□□□□□ -0.27
NPHP4-210ENST00000506941 C20orf173Q96LM9 149 aa13.38□□□□□ -0.27
NPHP4-210ENST00000506941 PFDN5Q99471 154 aa13.38□□□□□ -0.27
NPHP4-210ENST00000506941 RFNGQ9Y644 331 aa13.38□□□□□ -0.27
NPHP4-210ENST00000506941 A0A087X0K7 114 aa13.37□□□□□ -0.27
NPHP4-210ENST00000506941 TRAV5A0A0B4J249 113 aa13.37□□□□□ -0.27
NPHP4-210ENST00000506941 SMLR1H3BR10 107 aa13.37□□□□□ -0.27
NPHP4-210ENST00000506941 ISLRO14498 428 aa13.37□□□□□ -0.27
NPHP4-210ENST00000506941 ATF4P18848 351 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-210ENST00000506941 MEOX2P50222 304 aa13.37□□□□□ -0.27
NPHP4-210ENST00000506941 APOC4P55056 127 aa13.37□□□□□ -0.27
NPHP4-210ENST00000506941 PARD6GQ9BYG4 376 aaPredicted RBP13.37□□□□□ -0.27
NPHP4-210ENST00000506941 TNFSF18Q9UNG2 199 aa13.37□□□□□ -0.27
NPHP4-210ENST00000506941 TRAV8-2A0A0B4J237 113 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 KIR2DL5BA0A0G2JN68 375 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 KIR2DL5BA0A0G2JPC4 375 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 IFNA5P01569 189 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 ID1P41134 155 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 ACTL10Q5JWF8 245 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 IGFL4Q6B9Z1 124 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 TRPT1Q86TN4 253 aaKnown RBP13.36□□□□□ -0.27
NPHP4-210ENST00000506941 KIR2DL5AQ8N109 375 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 ZNF709Q8N972 641 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 KIR2DL5BQ8NHK3 375 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 GATAD1Q8WUU5 269 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 C16orf92Q96LL3 132 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 LINC00052Q96N35 136 aa13.36□□□□□ -0.27
NPHP4-210ENST00000506941 SNRPCP09234 159 aaKnown RBP13.35□□□□□ -0.27
NPHP4-210ENST00000506941 GDF5OSQ5U4N7 250 aa13.35□□□□□ -0.27
NPHP4-210ENST00000506941 SPATA31B1PQ5VZV4 182 aa13.35□□□□□ -0.27
NPHP4-210ENST00000506941 Q6ZNX1 250 aa13.35□□□□□ -0.27
NPHP4-210ENST00000506941 STHQ8IWL8 128 aa13.35□□□□□ -0.27
NPHP4-210ENST00000506941 SCGB1C1Q8TD33 95 aa13.35□□□□□ -0.27
NPHP4-210ENST00000506941 KCNIP2Q9NS61 270 aa13.35□□□□□ -0.27
NPHP4-210ENST00000506941 RNF24Q9Y225 148 aa13.35□□□□□ -0.27
NPHP4-210ENST00000506941 C17orf112F2Z3M2 114 aa13.34□□□□□ -0.27
NPHP4-210ENST00000506941 DEFB135Q30KP9 77 aa13.34□□□□□ -0.27
NPHP4-210ENST00000506941 SAMD13Q5VXD3 122 aa13.34□□□□□ -0.27
NPHP4-210ENST00000506941 BPIFA4PQ86YQ2 179 aa13.34□□□□□ -0.27
NPHP4-210ENST00000506941 RNF182Q8N6D2 247 aa13.34□□□□□ -0.27
NPHP4-210ENST00000506941 INO80EQ8NBZ0 244 aaPredicted RBP13.34□□□□□ -0.27
NPHP4-210ENST00000506941 UBE2CO00762 179 aa13.33□□□□□ -0.28
NPHP4-210ENST00000506941 IGLC2P0DOY2 106 aa13.33□□□□□ -0.28
NPHP4-210ENST00000506941 FFAR4Q5NUL3 377 aa13.33□□□□□ -0.28
NPHP4-210ENST00000506941 FAM78BQ5VT40 261 aa13.33□□□□□ -0.28
NPHP4-210ENST00000506941 OVOL2Q9BRP0 275 aa13.33□□□□□ -0.28
NPHP4-210ENST00000506941 CSTL1Q9H114 145 aa13.33□□□□□ -0.28
NPHP4-210ENST00000506941 F6UB75 175 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 H3BMM0 161 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 H3BQ15 152 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 H3BTX0 84 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 SLC17A3O00476 420 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 GIG44P09565 113 aaPredicted RBP13.32□□□□□ -0.28
NPHP4-210ENST00000506941 HLA-DRB4P13762 266 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 Q6ZWC4 215 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 MIR17HGQ75NE6 70 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 SLC25A2Q9BXI2 301 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 SAV1Q9H4B6 383 aaPredicted RBP13.32□□□□□ -0.28
NPHP4-210ENST00000506941 HLA-DRB4X5D2U9 266 aa13.32□□□□□ -0.28
NPHP4-210ENST00000506941 ARPC5O15511 151 aa13.31□□□□□ -0.28
NPHP4-210ENST00000506941 CA1P00915 261 aaPredicted RBP13.31□□□□□ -0.28
NPHP4-210ENST00000506941 C4BPBP20851 252 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms