RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 HLA-EP13747 358 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 SERPINB9P50453 376 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 ROMO1P60602 79 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 HSPE1P61604 102 aaKnown RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 VBP1P61758 197 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 MRPS25P82663 173 aaKnown RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 TAF1AQ15573 450 aaPredicted RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 SCGB2B2Q4G0G5 96 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR5AS1Q8N127 324 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR10AG1Q8NH19 301 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 STAG3L4Q8TBR4 150 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 LYSMD1Q96S90 227 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 PHB2Q99623 299 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 PRRT1Q99946 306 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 NPCDR1Q9BY65 106 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 TCEAL2Q9H3H9 227 aaPredicted RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 NIT2Q9NQR4 276 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 HSPB8Q9UJY1 196 aa0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 ARHGEF28Q8N1W1 1705 aaKnown RBP0.24□□□□□ -2.37
HMGB1P29-201ENST00000505659 NCAPD3P42695 1498 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 CECR2Q9BXF3 1484 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 PTPRFP10586 1907 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 A0A087WSZ3 146 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 TMEM210A6NLX4 147 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 TMEM256-PLSCR3K7ERE1 68 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 BANF1O75531 89 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 APOA2P02652 100 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 IFNA6P05013 189 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 IFNA4P05014 189 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 S100A6P06703 90 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 CTXN2P0C2S0 81 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 RAB5CP51148 216 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 DYNLT3P51808 116 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 ERVS71-1P61550 626 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 GRINAQ7Z429 371 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR5D16Q8NGK9 328 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 CHMP6Q96FZ7 201 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 C9orf16Q9BUW7 83 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 PSTPIP2Q9H939 334 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 PYCARDQ9ULZ3 195 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 RNF11Q9Y3C5 154 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 ARL5AQ9Y689 179 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 USP24Q9UPU5 2620 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 SCN8AQ9UQD0 1980 aa0.23□□□□□ -2.37
HMGB1P29-201ENST00000505659 MIA2Q96PC5 1412 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 TRAV27A0A087WT01 109 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 DUXBA0A1W2PPF3 345 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 G3V2T6 193 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 JMJD7-PLA2G4BH0Y9G9 81 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 M0R378 163 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 IFNA14P01570 189 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 CYBAP13498 195 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 NFYBP25208 207 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 HOXA6P31267 233 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 FXYD6P3P58550 94 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 NCALDP61601 193 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 SPATA45Q537H7 98 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 SPINK9Q5DT21 86 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 KRTAP26-1Q6PEX3 210 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 ARPINQ7Z6K5 226 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 LRRC18Q8N456 261 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR4K15Q8NH41 348 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 PPTC7Q8NI37 304 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 POP5Q969H6 163 aaKnown RBP0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 RAB37Q96AX2 223 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 CEP19Q96LK0 163 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 ZNF714Q96N38 554 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 OR2J1Q9GZK6 312 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 MAP1LC3BQ9GZQ8 125 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 WFDC10AQ9H1F0 79 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 C10orf95Q9H7T3 257 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 POPDC3Q9HBV1 291 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 ARMC1Q9NVT9 282 aa0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 PCF11O94913 1555 aaKnown RBP0.22□□□□□ -2.37
HMGB1P29-201ENST00000505659 UHRF1BP1Q6BDS2 1440 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 CITO14578 2027 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 FANCMQ8IYD8 2048 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 ZNF462Q96JM2 2506 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 NUP210LQ5VU65 1888 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 A0A096LPI6 279 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 TRAV5A0A0B4J249 113 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 hDV103S1A0JD37 113 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 H7C1C5 153 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 LYRM1O43325 122 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 ATG12O94817 140 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 PPYP01298 95 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 HSD11B1P28845 292 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 LCN6P62502 163 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 KLRD1Q13241 179 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 AKR1C8PQ5T2L2 129 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 C1orf134Q5TEV5 83 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 Q6ZS92 163 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 S100A7AQ86SG5 101 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 EXOC3-AS1Q8N2X6 119 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 CHCHD1Q96BP2 118 aaKnown RBP0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 ZHX1-C8orf76Q96EF9 292 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 MALSU1Q96EH3 234 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 HYLS1Q96M11 299 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 PBDC1Q9BVG4 233 aa0.21□□□□□ -2.38
HMGB1P29-201ENST00000505659 GGACTQ9BVM4 153 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms