RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 HYLS1Q96M11 299 aa9.32□□□□□ -0.92
SNCA-208ENST00000505199 PRR25Q96S07 402 aa9.32□□□□□ -0.92
SNCA-208ENST00000505199 CLEC5AQ9NY25 188 aa9.32□□□□□ -0.92
SNCA-208ENST00000505199 OR11H12B2RN74 326 aa9.31□□□□□ -0.92
SNCA-208ENST00000505199 MBP02144 154 aa9.31□□□□□ -0.92
SNCA-208ENST00000505199 PSMB3P49720 205 aa9.31□□□□□ -0.92
SNCA-208ENST00000505199 EIF5AP63241 154 aaKnown RBP9.31□□□□□ -0.92
SNCA-208ENST00000505199 GUK1Q16774 197 aa9.31□□□□□ -0.92
SNCA-208ENST00000505199 MRAPQ8TCY5 172 aa9.31□□□□□ -0.92
SNCA-208ENST00000505199 C19orf73Q9NVV2 129 aa9.31□□□□□ -0.92
SNCA-208ENST00000505199 TMEM14CQ9P0S9 112 aa9.31□□□□□ -0.92
SNCA-208ENST00000505199 IGHV3-66A0A0C4DH42 116 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 ZNF253O75346 499 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 ID1P41134 155 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 PDE6HQ13956 83 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 ODF3L2Q3SX64 289 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 SPATA31B1PQ5VZV4 182 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 UHRF2Q96PU4 802 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 SMIM3Q9BZL3 60 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 SLC25A32Q9H2D1 315 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 HRH4Q9H3N8 390 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 WFDC1Q9HC57 220 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 DOK5Q9P104 306 aa9.3□□□□□ -0.92
SNCA-208ENST00000505199 CD7P09564 240 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 IGHV4-30-4P0DP06 118 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 M6PRP20645 277 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 C4BPBP20851 252 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 RHOBP62745 196 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 ACOT6Q3I5F7 207 aaPredicted RBP9.29□□□□□ -0.92
SNCA-208ENST00000505199 LCN15Q6UWW0 184 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 B9D2Q9BPU9 175 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 ARPC5LQ9BPX5 153 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 SLC50A1Q9BRV3 221 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 RSG1Q9BU20 258 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 SCRT1Q9BWW7 348 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 SLC25A22Q9H936 323 aa9.29□□□□□ -0.92
SNCA-208ENST00000505199 SOCS3O14543 225 aa9.28□□□□□ -0.92
SNCA-208ENST00000505199 MRPS12O15235 138 aaKnown RBP9.28□□□□□ -0.92
SNCA-208ENST00000505199 ATF4P18848 351 aaPredicted RBP9.28□□□□□ -0.92
SNCA-208ENST00000505199 TAS2R45P59539 299 aa9.28□□□□□ -0.92
SNCA-208ENST00000505199 FAM78BQ5VT40 261 aa9.28□□□□□ -0.92
SNCA-208ENST00000505199 LINC00322Q6ZN03 302 aaPredicted RBP9.28□□□□□ -0.92
SNCA-208ENST00000505199 MAP6D1Q9H9H5 199 aa9.28□□□□□ -0.92
SNCA-208ENST00000505199 FUT9Q9Y231 359 aa9.28□□□□□ -0.92
SNCA-208ENST00000505199 DNAH3Q8TD57 4116 aa9.28□□□□□ -0.92
SNCA-208ENST00000505199 KIR2DL5BA0A0G2JN68 375 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 KIR2DL5BA0A0G2JPC4 375 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 KANTRA0A1W2PQU2 76 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 BCL2L11O43521 198 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 NHLRC4P0CG21 123 aaPredicted RBP9.27□□□□□ -0.93
SNCA-208ENST00000505199 IGLC2P0DOY2 106 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 ATP6V0CP27449 155 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 FFAR4Q5NUL3 377 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 KIR2DL5AQ8N109 375 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 GBGT1Q8N5D6 347 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 KIR2DL5BQ8NHK3 375 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 CLUHP3Q96NS8 147 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 TUBA4BQ9H853 241 aa9.27□□□□□ -0.93
SNCA-208ENST00000505199 SMLR1H3BR10 107 aa9.26□□□□□ -0.93
SNCA-208ENST00000505199 PRB2P02812 416 aaPredicted RBP9.26□□□□□ -0.93
SNCA-208ENST00000505199 SPP1P10451 314 aa9.26□□□□□ -0.93
SNCA-208ENST00000505199 KHDC3LQ587J8 217 aa9.26□□□□□ -0.93
SNCA-208ENST00000505199 TMEM41BQ5BJD5 291 aa9.26□□□□□ -0.93
SNCA-208ENST00000505199 DEFB121Q5J5C9 76 aa9.26□□□□□ -0.93
SNCA-208ENST00000505199 RPL7L1Q6DKI1 246 aaKnown RBP9.26□□□□□ -0.93
SNCA-208ENST00000505199 EIF5AL1Q6IS14 154 aaKnown RBP9.26□□□□□ -0.93
SNCA-208ENST00000505199 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.26□□□□□ -0.93
SNCA-208ENST00000505199 PQLC2Q6ZP29 291 aa9.26□□□□□ -0.93
SNCA-208ENST00000505199 HSD17B11Q8NBQ5 300 aa9.26□□□□□ -0.93
SNCA-208ENST00000505199 STOML3Q8TAV4 291 aa9.26□□□□□ -0.93
SNCA-208ENST00000505199 CYTL1Q9NRR1 136 aa9.26□□□□□ -0.93
SNCA-208ENST00000505199 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 A0A1W2PPV4 95 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 UMAD1C9J7I0 102 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 UBE2CO00762 179 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 FRMD6-AS1P0C7T7 363 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 SEC11BP0C7V7 166 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 HIST1H1EP10412 219 aaKnown RBP9.25□□□□□ -0.93
SNCA-208ENST00000505199 APOC4P55056 127 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 LEMD1Q68G75 181 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 LYPD1Q8N2G4 141 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 C16orf92Q96LL3 132 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 SRD5A3Q9H8P0 318 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 RPRMQ9NS64 109 aa9.25□□□□□ -0.93
SNCA-208ENST00000505199 hCG_2014768A0A024R1R8 64 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 LOC102724200A0A096LPH7 203 aaPredicted RBP9.24□□□□□ -0.93
SNCA-208ENST00000505199 PFDN1O60925 122 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 TPT1P13693 172 aaKnown RBP9.24□□□□□ -0.93
SNCA-208ENST00000505199 TFPI2P48307 235 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 DEFB131AP59861 70 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 PSG9Q00887 426 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 ZFP69Q49AA0 526 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 GCSAMLQ5JQS6 135 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 FOXI2Q6ZQN5 318 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 DEFB125Q8N687 156 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 OR10G4Q8NGN3 311 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 OR10G9Q8NGN4 311 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 OR10G7Q8NGN6 311 aa9.24□□□□□ -0.93
SNCA-208ENST00000505199 MRPL53Q96EL3 112 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms