RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TMEM61Q8N0U2 210 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 RSG1Q9BU20 258 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 HRH4Q9H3N8 390 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 HIGD1AQ9Y241 93 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 RFNGQ9Y644 331 aa6.16□□□□□ -1.42
CDC42SE2-208ENST00000505065 B2MP61769 119 aa6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 APRG1Q8IVJ8 170 aa6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 FXYD6-FXYD2A0A087WZ82 144 aa6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 M6PRP20645 277 aa6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 BMI1P35226 326 aa6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 GUK1Q16774 197 aa6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 CITED4Q96RK1 184 aa6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 MS4A6AQ9H2W1 248 aa6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 AURKAIP1Q9NWT8 199 aaPredicted RBP6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 CSMD3Q7Z407 3707 aa6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 FBN3Q75N90 2809 aa6.15□□□□□ -1.42
CDC42SE2-208ENST00000505065 S100A7P31151 101 aa6.15□□□□□ -1.43
CDC42SE2-208ENST00000505065 ODF3L2Q3SX64 289 aa6.15□□□□□ -1.43
CDC42SE2-208ENST00000505065 SLC51BQ86UW2 128 aa6.15□□□□□ -1.43
CDC42SE2-208ENST00000505065 SCRT1Q9BWW7 348 aa6.15□□□□□ -1.43
CDC42SE2-208ENST00000505065 MBP02144 154 aa6.15□□□□□ -1.43
CDC42SE2-208ENST00000505065 RAB31Q13636 194 aa6.15□□□□□ -1.43
CDC42SE2-208ENST00000505065 COX8CQ7Z4L0 72 aa6.15□□□□□ -1.43
CDC42SE2-208ENST00000505065 HELTA6NFD8 242 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 SULT1A2P50226 295 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 SIGLEC15Q6ZMC9 328 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 CCDC28AQ8IWP9 274 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 LYPD1Q8N2G4 141 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 AP2S1P53680 142 aaPredicted RBP6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 CLINT1Q14677 625 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 GCSAMLQ5JQS6 135 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 LINC00305Q7Z4B0 112 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 FAM24BQ8N5W8 94 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 ZNF586Q9NXT0 402 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 DNAH1Q9P2D7 4330 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 K7EIL1 84 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 CMC4P56277 68 aaPredicted RBP6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 C10orf113Q5VZT2 155 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 CLEC5AQ9NY25 188 aa6.14□□□□□ -1.43
CDC42SE2-208ENST00000505065 TRBV19A0A075B6N1 114 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 UMAD1C9J7I0 102 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 SPATA31B1PQ5VZV4 182 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 ODF3Q96PU9 254 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 ZNF331Q9NQX6 463 aaPredicted RBP6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 TRBV6-1A0A0K0K1D8 114 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 IFNA5P01569 189 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 ZFP69Q49AA0 526 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 BAP18Q8IXM2 172 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 C20orf173Q96LM9 149 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 NRN1Q9NPD7 142 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 H3BQ15 152 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 FHITP49789 147 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 RAB5CP51148 216 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 OXLD1Q5BKU9 147 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 S100A7AQ86SG5 101 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 MAP6D1Q9H9H5 199 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 RPRMQ9NS64 109 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 BORCS7-ASMTA0A0B4J1R7 106 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 GIG44P09565 113 aaPredicted RBP6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 RAB2AP61019 212 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 KHDC1LQ5JSQ8 128 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 FFAR4Q5NUL3 377 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 TCF24Q7RTU0 167 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 ARL6Q9H0F7 186 aa6.13□□□□□ -1.43
CDC42SE2-208ENST00000505065 ISLRO14498 428 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 ACOT6Q3I5F7 207 aaPredicted RBP6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 KHDC3LQ587J8 217 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 AMTNQ6UX39 209 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 MIR17HGQ75NE6 70 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 TRBV7-9A0A0J9YWB2 115 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 RBAKDNA6NC62 111 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 SAP30O75446 220 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 RPL7P18124 248 aaKnown RBP6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 LYZP61626 148 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 TRPT1Q86TN4 253 aaKnown RBP6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 STXBP6Q8NFX7 210 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 SAV1Q9H4B6 383 aaPredicted RBP6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 TPT1P13693 172 aaKnown RBP6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 CSNK1G2-AS1Q8NCQ2 148 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 TCEAL7Q9BRU2 100 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 JMJD1CQ15652 2540 aa6.12□□□□□ -1.43
CDC42SE2-208ENST00000505065 HIST1H1EP10412 219 aaKnown RBP6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 RHOBP62745 196 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 TMED6Q8WW62 240 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 UHRF2Q96PU4 802 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 SMIM3Q9BZL3 60 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 CTXND1A0A1B0GTU2 59 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 SMCO3A2RU48 225 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 LINC00467Q9BRT7 94 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 SLC50A1Q9BRV3 221 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 PFDN2Q9UHV9 154 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 TRAV5A0A0B4J249 113 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 NPIPB6E9PJ23 425 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 SLC17A3O00476 420 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 COX7A2P2O60397 106 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 LCN15Q6UWW0 184 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 PQLC2Q6ZP29 291 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 Q6ZRG5 221 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 WFDC3Q8IUB2 231 aa6.11□□□□□ -1.43
CDC42SE2-208ENST00000505065 PRELID1Q9Y255 219 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms