RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 NANOS2P60321 138 aaKnown RBP3.52□□□□□ -1.85
CDH9-203ENST00000505045 DHODHQ02127 395 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 ZNF90Q03938 601 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 PPP1R1AQ13522 171 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 TRPT1Q86TN4 253 aaKnown RBP3.52□□□□□ -1.85
CDH9-203ENST00000505045 LINC00518Q8N0U6 118 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 Q8NAQ8 132 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 DTD1Q8TEA8 209 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 NPIPB3Q92617 1050 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 IL22RA2Q969J5 263 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 ACY3Q96HD9 319 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 METTL26Q96S19 204 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 CSTL1Q9H114 145 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 CLEC5AQ9NY25 188 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 SHPKQ9UHJ6 478 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 SCP2D1Q9UJQ7 156 aa3.52□□□□□ -1.85
CDH9-203ENST00000505045 KRBOX1C9JBD0 128 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 PRSS46E5RG02 174 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 F5H697 171 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 H3BP45 60 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 UBE2CO00762 179 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 TRIAP1O43715 76 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 PITX3O75364 302 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 DEDDO75618 318 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 JTBO76095 146 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 MPC2O95563 127 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 PSG1P11464 419 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 NPPCP23582 126 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 BTCP35070 178 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 NUP62P37198 522 aaPredicted RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 SUB1P53999 127 aaKnown RBP eCLIP3.51□□□□□ -1.85
CDH9-203ENST00000505045 BTN1A1Q13410 526 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 SMCO1Q147U7 214 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 ACTL10Q5JWF8 245 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 GDF5OSQ5U4N7 250 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 C16orf54Q6UWD8 224 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 RPP25LQ8N5L8 163 aaKnown RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 OR11H7Q8NGC8 314 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 OR11H4Q8NGC9 324 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 OR51G1Q8NGK1 321 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 OR1S2Q8NGQ3 325 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 OR11H2Q8NH07 326 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 RNASEH2CQ8TDP1 164 aaKnown RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 C7orf50Q9BRJ6 194 aaKnown RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 TRAV2A0A0B4J234 112 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 NUPR2A6NF83 97 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 FAM90A26D6RGX4 464 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 DNASE2O00115 360 aaPredicted RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 BUB3O43684 328 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 LY6G6CO95867 125 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 TOMM40O96008 361 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 IFNA10P01566 189 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 TCRBP04435 133 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 RBMY1A1P0DJD3 496 aaKnown RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 RBMY1CP0DJD4 496 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 SLC25A4P12235 298 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 YPEL3P61236 119 aaPredicted RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 GAMTQ14353 236 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 OPCMLQ14982 345 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 RBMY1FQ15415 496 aaKnown RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 PSMG4Q5JS54 123 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 CEMP1Q6PRD7 247 aaPredicted RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 TMEM182Q6ZP80 229 aaPredicted RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 LGI3Q8N145 548 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 TOMM5Q8N4H5 51 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 CSNK1G2-AS1Q8NCQ2 148 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 PHLDA1Q8WV24 401 aaPredicted RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 RNF125Q96EQ8 232 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 C17orf77Q96MU5 243 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 LINC00052Q96N35 136 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 RARRES2Q99969 163 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 SCRT1Q9BWW7 348 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 MAGT1Q9H0U3 335 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 C11orf68Q9H3H3 251 aaKnown RBP3.51□□□□□ -1.85
CDH9-203ENST00000505045 CELA1Q9UNI1 258 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 FLVCR2Q9UPI3 526 aa3.51□□□□□ -1.85
CDH9-203ENST00000505045 IGHV4-28A0A0C4DH34 117 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 SOCS3O14543 225 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 ADAP1O75689 374 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 CFDP00746 253 aaPredicted RBP3.5□□□□□ -1.85
CDH9-203ENST00000505045 HOXB5P09067 269 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 PRB4P10163 310 aaPredicted RBP3.5□□□□□ -1.85
CDH9-203ENST00000505045 GATA2P23769 480 aaPredicted RBP3.5□□□□□ -1.85
CDH9-203ENST00000505045 UBE2MP61081 183 aaKnown RBP3.5□□□□□ -1.85
CDH9-203ENST00000505045 PAFAH1B2P68402 229 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 S100A12P80511 92 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 FLI1Q01543 452 aaPredicted RBP3.5□□□□□ -1.85
CDH9-203ENST00000505045 DHRS2Q13268 280 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 OR2F1Q13607 317 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 TMEM128Q5BJH2 165 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 STHQ8IWL8 128 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 LRTM2Q8N967 370 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 OR1S1Q8NH92 325 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 GATAD1Q8WUU5 269 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 GRAMD2BQ96HH9 432 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 PBDC1Q9BVG4 233 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 FBXL17Q9UF56 701 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 KIAA1109Q2LD37 5005 aa3.5□□□□□ -1.85
CDH9-203ENST00000505045 TRAV6A0A075B6T7 132 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms