RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 ZNF146Q15072 292 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 CENPWQ5EE01 88 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 MUC21Q5SSG8 566 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 TMEM136Q6ZRR5 245 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 APRG1Q8IVJ8 170 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 OR8I2Q8N0Y5 310 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 MTURNQ8N3F0 131 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 TPRX1Q8N7U7 411 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 OR4P4Q8NGL7 312 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 OR2Y1Q8NGV0 311 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 OR1L1Q8NH94 360 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 TMEM190Q8WZ59 177 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 POM121L2Q96KW2 1035 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 ZNF488Q96MN9 340 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 OR2V2Q96R30 315 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 PMCHL2Q9BQD1 86 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 GGTLC1Q9BX51 225 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 MRPL32Q9BYC8 188 aaKnown RBP3.26□□□□□ -1.89
RFC1-208ENST00000504849 GNB4Q9HAV0 340 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 ST20Q9HBF5 79 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 PROK2Q9HC23 129 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 DEPPQ9NTK1 212 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 TP53TG3Q9ULZ0 132 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 C2CD3Q4AC94 2353 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 FREM3P0C091 2139 aa3.26□□□□□ -1.89
RFC1-208ENST00000504849 ADAMTS9Q9P2N4 1935 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 A0A087WW49 117 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 A0A1B0GUS0 222 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 A0A1W2PRD5 423 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 SMIM27A0A1W2PRY6 76 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 C17orf98A8MV24 154 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 SMIM1B2RUZ4 78 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 C12orf77C9JDV5 145 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 K7ERU9 68 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 M0R1X1 148 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 M0R2Z0 102 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 SLC17A3O00476 420 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 CA2P00918 260 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 HBZP02008 142 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 C3orf79P0CE67 100 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 HIST1H1EP10412 219 aaKnown RBP3.25□□□□□ -1.89
RFC1-208ENST00000504849 CCL2P13500 99 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 NTF3P20783 257 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 NPY1RP25929 384 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 TSPOP30536 169 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 VDAC2P45880 294 aaPredicted RBP3.25□□□□□ -1.89
RFC1-208ENST00000504849 TFPI2P48307 235 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 CYB561P49447 251 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 ERVK11-1P61568 191 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 EIF4EBP1Q13541 118 aaPredicted RBP3.25□□□□□ -1.89
RFC1-208ENST00000504849 MMDQ15546 238 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 PRSS8Q16651 343 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 SMIM21Q3B7S5 101 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 LRRC10Q5BKY1 277 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 FAM120AOSQ5T036 256 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 IBA57Q5T440 356 aaKnown RBP3.25□□□□□ -1.89
RFC1-208ENST00000504849 MIC13Q5XKP0 118 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 GUSBP11Q6P575 273 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 C12orf54Q6X4T0 127 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 ATP5L2Q7Z4Y8 100 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 SLC25A45Q8N413 288 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 Q8N976 141 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 ZNF439Q8NDP4 499 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 OR4S2Q8NH73 311 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 ABHD3Q8WU67 409 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 SMIM12Q96EX1 92 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 ADTRPQ96IZ2 230 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 MGST2Q99735 147 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 VPS25Q9BRG1 176 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 DERL1Q9BUN8 251 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 C1QTNF4Q9BXJ3 329 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 TMEM191AQ9H0A3 160 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 JPT1Q9UK76 154 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 YTHDF2Q9Y5A9 579 aaKnown RBP3.25□□□□□ -1.89
RFC1-208ENST00000504849 SOX21Q9Y651 276 aaPredicted RBP3.25□□□□□ -1.89
RFC1-208ENST00000504849 V9GYV3 84 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 C2orf16Q68DN1 1984 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 OTOGLQ3ZCN5 2332 aa3.25□□□□□ -1.89
RFC1-208ENST00000504849 DMXL2Q8TDJ6 3036 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 TRBV20OR9-2A0A075B6H5 130 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 IGHV2OR16-5A0A0B4J2B6 119 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 IGHV3-38A0A0C4DH36 116 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 A0A1B0GVY2 172 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 A0A1W2PRE2 83 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 IGLC7A0M8Q6 106 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 EPOPA6NHQ4 379 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 K7EN84 100 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 BMPR1BO00238 502 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 OR7C2O60412 319 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 IGKV3-20P01619 116 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 IGHV3-9P01782 118 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 OR5AL1P0C617 328 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 MGST1P10620 155 aaKnown RBP3.24□□□□□ -1.89
RFC1-208ENST00000504849 HINT1P49773 126 aaPredicted RBP3.24□□□□□ -1.89
RFC1-208ENST00000504849 PPOXP50336 477 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 ZNF83P51522 516 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 MFAP2P55001 183 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 RBX1P62877 108 aa3.24□□□□□ -1.89
RFC1-208ENST00000504849 RPL30P62888 115 aaKnown RBP3.24□□□□□ -1.89
RFC1-208ENST00000504849 PSG7Q13046 419 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms