RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 NPPCP23582 126 aa4.99□□□□□ -1.61
LINC02397-201ENST00000504409 KIAA1644Q3SXP7 199 aa4.99□□□□□ -1.61
LINC02397-201ENST00000504409 DAND5Q8N907 189 aa4.99□□□□□ -1.61
LINC02397-201ENST00000504409 RASL10BQ96S79 203 aa4.99□□□□□ -1.61
LINC02397-201ENST00000504409 TMEM14BQ9NUH8 114 aa4.99□□□□□ -1.61
LINC02397-201ENST00000504409 F6UB75 175 aa4.99□□□□□ -1.61
LINC02397-201ENST00000504409 GTSF1Q8WW33 167 aa4.99□□□□□ -1.61
LINC02397-201ENST00000504409 HILPDAQ9Y5L2 63 aa4.99□□□□□ -1.61
LINC02397-201ENST00000504409 hDV102S1A0JD36 115 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 CD3EP07766 207 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 VKORC1Q9BQB6 163 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 C17orf99Q6UX52 265 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 TRPT1Q86TN4 253 aaKnown RBP4.98□□□□□ -1.61
LINC02397-201ENST00000504409 FOXA3P55318 350 aaPredicted RBP4.98□□□□□ -1.61
LINC02397-201ENST00000504409 C5orf67F2Z3F1 127 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 PSG4Q00888 419 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 ZNF524Q96C55 264 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 ARHGEF17Q96PE2 2063 aaPredicted RBP4.98□□□□□ -1.61
LINC02397-201ENST00000504409 CFC1BP0CG36 223 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 CFC1P0CG37 223 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 PRO0628Q9UI54 55 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.98□□□□□ -1.61
LINC02397-201ENST00000504409 SHISA7A6NL88 538 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 CXCL13O43927 109 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 COL9A2Q14055 689 aaPredicted RBP4.98□□□□□ -1.61
LINC02397-201ENST00000504409 PRSS57Q6UWY2 283 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 CRIPAKQ8N1N5 446 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 TMEM243Q9BU79 118 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 SUMO2P61956 95 aaKnown RBP4.98□□□□□ -1.61
LINC02397-201ENST00000504409 ABHD12Q8N2K0 398 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 THAP8Q8NA92 274 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 ZPLD1Q8TCW7 415 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 IGKV3D-15A0A087WSY6 115 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 GFRA3O60609 400 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 NDUFS7O75251 213 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 NTF4P34130 210 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 SPACA3Q8IXA5 215 aa4.98□□□□□ -1.61
LINC02397-201ENST00000504409 MBNL3Q9NUK0 354 aaKnown RBP4.98□□□□□ -1.61
LINC02397-201ENST00000504409 C9JQL5 133 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 FAM201AQ5SY85 155 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 SS18L2Q9UHA2 77 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.97□□□□□ -1.61
LINC02397-201ENST00000504409 SIGLEC9Q9Y336 463 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 SHISA8B8ZZ34 492 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 K7EM74 188 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 CEACAM4O75871 244 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 ESPL1Q14674 2120 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 TRAV24A0A0B4J272 114 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 MED19A0JLT2 244 aaPredicted RBP4.97□□□□□ -1.61
LINC02397-201ENST00000504409 WIPF3A6NGB9 483 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 MDKP21741 143 aaPredicted RBP4.97□□□□□ -1.61
LINC02397-201ENST00000504409 TMEM167AQ8TBQ9 72 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 A0A1W2PNR3 127 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 IGHV1-69P01742 117 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 SCRT1Q9BWW7 348 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 CRIM1Q9NZV1 1036 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 H7C2G1 150 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 TIMM17BO60830 172 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 NDUFA3O95167 84 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 HERVK_113P63121 156 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 DDB2Q92466 427 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 RAI1Q7Z5J4 1906 aaPredicted RBP4.97□□□□□ -1.61
LINC02397-201ENST00000504409 NTN3O00634 580 aaPredicted RBP4.97□□□□□ -1.61
LINC02397-201ENST00000504409 MAFAQ8NHW3 353 aaPredicted RBP4.97□□□□□ -1.61
LINC02397-201ENST00000504409 PDE4DIPQ5VU43 2346 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 TRAV25A0A0B4J276 109 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 ZNF474Q6S9Z5 364 aaPredicted RBP4.97□□□□□ -1.61
LINC02397-201ENST00000504409 SERP1Q9Y6X1 66 aa4.97□□□□□ -1.61
LINC02397-201ENST00000504409 TRBV7-1A0A0A6YYK4 115 aa4.96□□□□□ -1.61
LINC02397-201ENST00000504409 TRGV5A0A0B4J1U4 118 aa4.96□□□□□ -1.61
LINC02397-201ENST00000504409 LMO1P25800 156 aa4.96□□□□□ -1.61
LINC02397-201ENST00000504409 PDCD1Q15116 288 aa4.96□□□□□ -1.61
LINC02397-201ENST00000504409 MIR17HGQ75NE6 70 aa4.96□□□□□ -1.61
LINC02397-201ENST00000504409 TIMM17AQ99595 171 aa4.96□□□□□ -1.61
LINC02397-201ENST00000504409 IGHV4-39P01824 125 aa4.96□□□□□ -1.61
LINC02397-201ENST00000504409 CCL3L1P16619 93 aa4.96□□□□□ -1.61
LINC02397-201ENST00000504409 SERP2Q8N6R1 65 aa4.96□□□□□ -1.61
LINC02397-201ENST00000504409 WFDC5Q8TCV5 224 aa4.96□□□□□ -1.61
LINC02397-201ENST00000504409 IGKV3D-11A0A0A0MRZ8 115 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 CT62P0C5K7 136 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 PAX9P55771 341 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 LILRA3Q8N6C8 439 aaPredicted RBP4.96□□□□□ -1.62
LINC02397-201ENST00000504409 ZNF138P52744 262 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 NRGNQ92686 78 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 C11orf86A6NJI1 115 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 NABP1Q96AH0 204 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 HCFC1P51610 2035 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 CABIN1Q9Y6J0 2220 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 RPS27P42677 84 aaKnown RBP4.96□□□□□ -1.62
LINC02397-201ENST00000504409 TRBV25-1A0A075B6N4 114 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 IGKV1D-16P01601 117 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 CECR9P0C854 216 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 FGF6P10767 208 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 TMEM158Q8WZ71 300 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 LINC00526Q96FQ7 95 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 IGHV3OR15-7A0A075B7D8 119 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 SPSB2Q99619 263 aa4.96□□□□□ -1.62
LINC02397-201ENST00000504409 IGKV1-8A0A0C4DH67 115 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 FAM223BA6NKX1 122 aa4.95□□□□□ -1.62
LINC02397-201ENST00000504409 C12orf77C9JDV5 145 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms