RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 COX8AP10176 69 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 FCGR2BP31994 310 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-208ENST00000504387 PRCDQ00LT1 54 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 C17orf58Q2M2W7 97 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 FAM90A1Q86YD7 464 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 AMN1Q8IY45 258 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 WDR31Q8NA23 367 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 NEU4Q8WWR8 484 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-208ENST00000504387 NHP2Q9NX24 153 aaKnown RBP6.12□□□□□ -1.43
NEDD9-208ENST00000504387 JKAMPQ9P055 326 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 PRNDQ9UKY0 176 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 TSSC4Q9Y5U2 329 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-208ENST00000504387 MAP1AP78559 2803 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-208ENST00000504387 TRGV8A0A0C4DH27 118 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 IGHV3-35A0A0C4DH35 117 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 A1L4Q6 167 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 D6R8Y8 96 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 LTAP01374 205 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 RBP4P02753 201 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 IGFL4Q6B9Z1 124 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 RBPMS2Q6ZRY4 209 aaKnown RBP6.12□□□□□ -1.43
NEDD9-208ENST00000504387 DDB2Q92466 427 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 CCL17Q92583 94 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 MALRD1Q5VYJ5 2156 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 PPIAL4EA0A075B759 164 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 C9orf118A6NHY6 69 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 CIDEAO60543 219 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 OR2J3O76001 311 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 PPIAL4FP0DN26 164 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 WFDC2Q14508 124 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 ZNF747Q9BV97 191 aa6.12□□□□□ -1.43
NEDD9-208ENST00000504387 A0A1B0GXF2 115 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 A6NDN8 102 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 LGALS7P47929 136 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 ATP5G2Q06055 141 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 ETDBQ3ZM63 59 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 Q6ZT83 130 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 FAM222BQ8WU58 562 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 EVI2AP22794 236 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 KIR2DL2P43627 348 aaPredicted RBP6.11□□□□□ -1.43
NEDD9-208ENST00000504387 CSN1S1P47710 185 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 FXYD2P54710 66 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 SAMD5Q5TGI4 173 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 PET117Q6UWS5 81 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 ANKRD11Q6UB99 2663 aaPredicted RBP6.11□□□□□ -1.43
NEDD9-208ENST00000504387 ARHGAP32A7KAX9 2087 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 CUBNO60494 3623 aa6.11□□□□□ -1.43
NEDD9-208ENST00000504387 TLN1Q9Y490 2541 aaKnown RBP6.1□□□□□ -1.43
NEDD9-208ENST00000504387 C22orf46C9J442 243 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 FABP2P12104 132 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 CNTFRP26992 372 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 TNFAIP6P98066 277 aaPredicted RBP6.1□□□□□ -1.43
NEDD9-208ENST00000504387 FAM27E3Q08E93 113 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 BCL6BQ8N143 479 aaPredicted RBP6.1□□□□□ -1.43
NEDD9-208ENST00000504387 FAM169BQ8N8A8 192 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 OR10X1Q8NGY0 326 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 WIPF2Q8TF74 440 aaPredicted RBP6.1□□□□□ -1.43
NEDD9-208ENST00000504387 ARPC1AQ92747 370 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 ATRXP46100 2492 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 IGHV1-18A0A0C4DH31 117 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 KBTBD11-OT1A0A1B0GTJ5 212 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 H3BMG7 143 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 K7EP34 96 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 DLL1O00548 723 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 GAS8-AS1O95177 125 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 TGFAP01135 160 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 TCRAP04437 139 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 PRSS1P07477 247 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 CD59P13987 128 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 INSL3P51460 131 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 ADAMTSL5Q6ZMM2 481 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 GTSCR1Q86UQ5 136 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 MDS2Q8NDY4 140 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 CHCHD1Q96BP2 118 aaKnown RBP6.1□□□□□ -1.43
NEDD9-208ENST00000504387 NPFFR1Q9GZQ6 430 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 INSIG2Q9Y5U4 225 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 PCSK5Q92824 1860 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 A0A1B0GUT8 65 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 TNFRSF1AP19438 455 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 ZADH2Q8N4Q0 377 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 TMEM75Q8N9X5 138 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 OR1L8Q8NGR8 309 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 C8orf49Q96NF6 230 aa6.1□□□□□ -1.43
NEDD9-208ENST00000504387 SRSF8Q9BRL6 282 aaKnown RBP6.1□□□□□ -1.43
NEDD9-208ENST00000504387 IGKV1D-37A0A075B6S9 117 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 IGKV2D-26A0A0A0MRZ7 120 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 A0A1W2PPM0 123 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 TCRBV4S1A1TA0A5B7 111 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 LINC01545Q5VT33 79 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 PIP4P2Q8N4L2 257 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 ZNF414Q96IQ9 312 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 OTOGLQ3ZCN5 2332 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 SRRM5B3KS81 715 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 CDX4O14627 284 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-208ENST00000504387 CRXO43186 299 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-208ENST00000504387 SP9P0CG40 484 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 CEACAM3P40198 252 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 RBPJQ06330 500 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 C2orf83Q53S99 150 aa6.09□□□□□ -1.43
NEDD9-208ENST00000504387 FAM231DQ6ZW35 169 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms