RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 RRAS2P62070 204 aaPredicted RBP8.6□□□□□ -1.03
MED28-203ENST00000503945 PRR20EP86478 221 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 PRR20CP86479 221 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 PRR20DP86480 221 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 PRR20BP86481 221 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 PRR20AP86496 221 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 FGL1Q08830 312 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 GSG1LQ6UXU4 331 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 MITD1Q8WV92 249 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 SLC25A39Q9BZJ4 359 aaPredicted RBP8.6□□□□□ -1.03
MED28-203ENST00000503945 SLC25A32Q9H2D1 315 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 RNF24Q9Y225 148 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 HIGD1AQ9Y241 93 aa8.6□□□□□ -1.03
MED28-203ENST00000503945 IGHV4-4A0A075B6R2 117 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 A0A0J9YX75 114 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 PMS2P5A8MQ11 134 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 ZNF705FA8MVS1 300 aaPredicted RBP8.59□□□□□ -1.03
MED28-203ENST00000503945 F6UB75 175 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 DUSP14O95147 198 aaKnown RBP8.59□□□□□ -1.03
MED28-203ENST00000503945 METTL15P1P0C7V9 234 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 ZNF705DP0CH99 300 aaPredicted RBP8.59□□□□□ -1.03
MED28-203ENST00000503945 ZNF705BP0CI00 300 aaPredicted RBP8.59□□□□□ -1.03
MED28-203ENST00000503945 RPL7P18124 248 aaKnown RBP8.59□□□□□ -1.03
MED28-203ENST00000503945 DLK1P80370 383 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 ZNF846Q147U1 533 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 TEPPQ6URK8 271 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 TMEM14EPQ6UXP3 125 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 ZNF767PQ75MW2 155 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 LRRC20Q8TCA0 184 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 C20orf173Q96LM9 149 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 RNF126Q9BV68 326 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 SLC35B3Q9H1N7 401 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 DOK5Q9P104 306 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 MGAT4CQ9UBM8 478 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 RFNGQ9Y644 331 aa8.59□□□□□ -1.03
MED28-203ENST00000503945 FNDC10F2Z333 226 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 L7N2F9 121 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 GOSR2O14653 212 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 PLA2G10O15496 165 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 LYRM1O43325 122 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 TSC22D2O75157 780 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 HBE1P02100 147 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 LINC00869P0C866 280 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 BTCP35070 178 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 PLP1P60201 277 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 VAMP2P63027 116 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 ZNF709Q8N972 641 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 ZBTB8BQ8NAP8 495 aaPredicted RBP8.58□□□□□ -1.04
MED28-203ENST00000503945 SHANK2-AS3Q9BTD1 123 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 TMEM208Q9BTX3 173 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 NDUFAF3Q9BU61 184 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 GGACTQ9BVM4 153 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 ARL6Q9H0F7 186 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 CELA1Q9UNI1 258 aa8.58□□□□□ -1.04
MED28-203ENST00000503945 C7orf66A4D0T2 115 aa8.57□□□□□ -1.04
MED28-203ENST00000503945 FAM25EA8MYX2 175 aa8.57□□□□□ -1.04
MED28-203ENST00000503945 MBPP02686 304 aaPredicted RBP8.57□□□□□ -1.04
MED28-203ENST00000503945 TCRBP04435 133 aa8.57□□□□□ -1.04
MED28-203ENST00000503945 RAB31Q13636 194 aa8.57□□□□□ -1.04
MED28-203ENST00000503945 RRN3P1Q2M238 152 aa8.57□□□□□ -1.04
MED28-203ENST00000503945 PXDC1Q5TGL8 231 aa8.57□□□□□ -1.04
MED28-203ENST00000503945 IGFL4Q6B9Z1 124 aa8.57□□□□□ -1.04
MED28-203ENST00000503945 C17orf77Q96MU5 243 aa8.57□□□□□ -1.04
MED28-203ENST00000503945 SCRT1Q9BWW7 348 aa8.57□□□□□ -1.04
MED28-203ENST00000503945 PPP1R14DQ9NXH3 145 aa8.57□□□□□ -1.04
MED28-203ENST00000503945 DNAH17Q9UFH2 4485 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 TRAV6A0A075B6T7 132 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 TEX48A0A1B0GUV7 120 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 C5orf51A6NDU8 294 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 H3BRN7 92 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 AMBPP02760 352 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 BCAP31P51572 246 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 CNN1P51911 297 aaKnown RBP8.56□□□□□ -1.04
MED28-203ENST00000503945 B2MP61769 119 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 C1orf158Q8N1D5 194 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 ZNF738Q8NE65 137 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 IGF2BP2-AS1Q96M15 143 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 NIPSNAP3BQ9BS92 247 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 C20orf85Q9H1P6 137 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 DKK2Q9UBU2 259 aa8.56□□□□□ -1.04
MED28-203ENST00000503945 TRAV8-2A0A0B4J237 113 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 K7EPK0 472 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 CCNKO75909 580 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 P0DMU3 169 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 FAM231AP0DMU4 169 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 FAM231CP0DMU5 169 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 RHOBP62745 196 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 FAM222AQ5U5X8 452 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 PATE2Q6UY27 113 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 Q6ZRG5 221 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 C12orf45Q8N5I9 185 aaPredicted RBP8.55□□□□□ -1.04
MED28-203ENST00000503945 RNF182Q8N6D2 247 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 ZNF431Q8TF32 576 aaPredicted RBP8.55□□□□□ -1.04
MED28-203ENST00000503945 UHRF2Q96PU4 802 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 ARV1Q9H2C2 271 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 PLA2G2EQ9NZK7 142 aa8.55□□□□□ -1.04
MED28-203ENST00000503945 LOC102723971A0A1B0GUV8 181 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 FAM240BA0A1B0GVZ2 78 aa8.54□□□□□ -1.04
MED28-203ENST00000503945 AGPAT2O15120 278 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms