RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 CRIM1Q9NZV1 1036 aa13.17□□□□□ -0.3
HMGXB3-202ENST00000503427 KIAA1671Q9BY89 1806 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 TRAV41A0A0B4J266 112 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 B4DSR2 109 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 LAGE3Q14657 143 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 LYZL1Q6UWQ5 148 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 TMEM155Q4W5P6 130 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 MEGF9Q9H1U4 602 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 ZNF815PA8K554 130 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 LINC00205P59089 165 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 MRPL52Q86TS9 123 aaKnown RBP13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 RPRMLQ8N4K4 120 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 CUL9Q8IWT3 2517 aa13.16□□□□□ -0.3
HMGXB3-202ENST00000503427 PKDREJQ9NTG1 2253 aa13.15□□□□□ -0.3
HMGXB3-202ENST00000503427 TRGV11A0A075B6L2 103 aa13.15□□□□□ -0.3
HMGXB3-202ENST00000503427 SIGLEC9Q9Y336 463 aa13.15□□□□□ -0.3
HMGXB3-202ENST00000503427 HELZP42694 1942 aaKnown RBP13.15□□□□□ -0.3
HMGXB3-202ENST00000503427 A6NNC1 897 aa13.15□□□□□ -0.3
HMGXB3-202ENST00000503427 CEACAM8P31997 349 aaPredicted RBP13.15□□□□□ -0.3
HMGXB3-202ENST00000503427 RPL15P61313 204 aaKnown RBP13.15□□□□□ -0.3
HMGXB3-202ENST00000503427 HS3ST6Q96QI5 342 aa13.15□□□□□ -0.3
HMGXB3-202ENST00000503427 TOMM7Q9P0U1 55 aa13.15□□□□□ -0.3
HMGXB3-202ENST00000503427 C5orf64Q2M2E5 130 aa13.15□□□□□ -0.3
HMGXB3-202ENST00000503427 TRGV2A0A075B6R0 118 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 E7EQL1 145 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 RNF182Q8N6D2 247 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 ZNF479Q96JC4 524 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 HEATR5AQ86XA9 2040 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 PSG3Q16557 428 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 BUB1B-PAK6H3BSN5 160 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 DLEU1O43261 78 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 TOMM40O96008 361 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 KIAA2026Q5HYC2 2103 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 LMO1P25800 156 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 KIR3DL3Q8N743 410 aa13.14□□□□□ -0.31
HMGXB3-202ENST00000503427 ZNF664Q8N3J9 261 aa13.13□□□□□ -0.31
HMGXB3-202ENST00000503427 NCR2O95944 276 aa13.13□□□□□ -0.31
HMGXB3-202ENST00000503427 SAMD5Q5TGI4 173 aa13.13□□□□□ -0.31
HMGXB3-202ENST00000503427 TRBV7-9A0A0J9YWB2 115 aa13.13□□□□□ -0.31
HMGXB3-202ENST00000503427 ZNF138P52744 262 aa13.13□□□□□ -0.31
HMGXB3-202ENST00000503427 FER1L5A0AVI2 2057 aa13.13□□□□□ -0.31
HMGXB3-202ENST00000503427 PLNP26678 52 aa13.13□□□□□ -0.31
HMGXB3-202ENST00000503427 ZNF329Q86UD4 541 aa13.13□□□□□ -0.31
HMGXB3-202ENST00000503427 GATA4P43694 442 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 LCN12Q6JVE5 192 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 ABCA4P78363 2273 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 SYS1-DBNDD2H3BUS1 97 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 WISP1O95388 367 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 C9orf139Q6ZV77 190 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 ZNF524Q96C55 264 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 RBMY1BA6NDE4 496 aaKnown RBP13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 RBMY1EA6NEQ0 496 aaKnown RBP13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 SH2D1AO60880 128 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 PFN1P07737 140 aaKnown RBP13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 RBMY1DP0C7P1 496 aaKnown RBP13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 RBMY1A1P0DJD3 496 aaKnown RBP13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 RBMY1CP0DJD4 496 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 TRAV8-2A0A0B4J237 113 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 SRSF8Q9BRL6 282 aaKnown RBP13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 J3QKU1 62 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 COL8A2P25067 703 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 Q0VG73 95 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 STHQ8IWL8 128 aa13.12□□□□□ -0.31
HMGXB3-202ENST00000503427 IGKV1-16P04430 117 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 CD28P10747 220 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 PAX9P55771 341 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 TCF15Q12870 199 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 PRR30Q53SZ7 412 aaPredicted RBP13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 SFTA2Q6UW10 78 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 Q8TCH9 128 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 KLRD1Q13241 179 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 GUSBP1Q15486 140 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 GFRA4Q9GZZ7 299 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 SLC25A16P16260 332 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 NCOR1P1Q9H4R4 102 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 CD300EQ496F6 205 aaPredicted RBP13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 KLF17Q5JT82 389 aaPredicted RBP13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 DOCK9Q9BZ29 2069 aa13.11□□□□□ -0.31
HMGXB3-202ENST00000503427 TRAV2A0A0B4J234 112 aa13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 C10orf91Q5T1B1 145 aa13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 LINC00527Q9UJ94 153 aa13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 TRBV7-1A0A0A6YYK4 115 aa13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 hDV102S1A0JD36 115 aa13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 MLANAQ16655 118 aa13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 GTSCR1Q86UQ5 136 aa13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 TRAV8-1A0A0A6YYK1 113 aa13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 PRTN3P24158 256 aa13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 LYPD2Q6UXB3 125 aa13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 DMRTC2Q8IXT2 367 aaPredicted RBP13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 PRB4P10163 310 aaPredicted RBP13.1□□□□□ -0.31
HMGXB3-202ENST00000503427 NDUFS8O00217 210 aa13.09□□□□□ -0.31
HMGXB3-202ENST00000503427 CD33P20138 364 aa13.09□□□□□ -0.31
HMGXB3-202ENST00000503427 Q86TA4 180 aa13.09□□□□□ -0.31
HMGXB3-202ENST00000503427 LINC00477Q96M19 166 aa13.09□□□□□ -0.31
HMGXB3-202ENST00000503427 TDGF1P13385 188 aa13.09□□□□□ -0.31
HMGXB3-202ENST00000503427 PAX2Q02962 417 aa13.09□□□□□ -0.31
HMGXB3-202ENST00000503427 BCL6BQ8N143 479 aaPredicted RBP13.09□□□□□ -0.31
HMGXB3-202ENST00000503427 TMEM14BQ9NUH8 114 aa13.09□□□□□ -0.31
HMGXB3-202ENST00000503427 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.09□□□□□ -0.31
HMGXB3-202ENST00000503427 GAGE13Q4V321 117 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms