RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 MAST4O15021 2626 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 MRPS12O15235 138 aaKnown RBP17.07■□□□□ 0.32
PTPN13-205ENST00000502971 SLC25A5P05141 298 aaKnown RBP17.07■□□□□ 0.32
PTPN13-205ENST00000502971 IGLC2P0DOY2 106 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 TPPP2P59282 170 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 RELQ04864 619 aaPredicted RBP17.07■□□□□ 0.32
PTPN13-205ENST00000502971 TOMM20LQ6UXN7 152 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 C5orf17Q8NAS9 161 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 SFRP2Q96HF1 295 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 ZNF414Q96IQ9 312 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 OR5B12Q96R08 314 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 GNB4Q9HAV0 340 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 MLXQ9UH92 298 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 CDC42EP3Q9UKI2 254 aa17.07■□□□□ 0.32
PTPN13-205ENST00000502971 TEX15Q9BXT5 2789 aa17.06■□□□□ 0.32
PTPN13-205ENST00000502971 MYO9AB2RTY4 2548 aa17.06■□□□□ 0.32
PTPN13-205ENST00000502971 AKAP9Q99996 3911 aa17.06■□□□□ 0.32
PTPN13-205ENST00000502971 TRBV19A0A075B6N1 114 aa17.05■□□□□ 0.32
PTPN13-205ENST00000502971 IGLV1-40P01703 118 aa17.05■□□□□ 0.32
PTPN13-205ENST00000502971 CFHR3Q02985 330 aa17.05■□□□□ 0.32
PTPN13-205ENST00000502971 LYPD1Q8N2G4 141 aa17.05■□□□□ 0.32
PTPN13-205ENST00000502971 IGF2BP2-AS1Q96M15 143 aa17.05■□□□□ 0.32
PTPN13-205ENST00000502971 ZFAND3Q9H8U3 227 aa17.05■□□□□ 0.32
PTPN13-205ENST00000502971 K7EN84 100 aa17.04■□□□□ 0.32
PTPN13-205ENST00000502971 S100PP25815 95 aa17.04■□□□□ 0.32
PTPN13-205ENST00000502971 GALR1P47211 349 aa17.04■□□□□ 0.32
PTPN13-205ENST00000502971 ZNF469Q96JG9 3925 aaPredicted RBP17.04■□□□□ 0.32
PTPN13-205ENST00000502971 H3BTX0 84 aa17.04■□□□□ 0.32
PTPN13-205ENST00000502971 SMAD7O15105 426 aaKnown RBP17.04■□□□□ 0.32
PTPN13-205ENST00000502971 S100A9P06702 114 aaKnown RBP17.04■□□□□ 0.32
PTPN13-205ENST00000502971 PFN1P07737 140 aaKnown RBP17.04■□□□□ 0.32
PTPN13-205ENST00000502971 CXCL1P09341 107 aa17.04■□□□□ 0.32
PTPN13-205ENST00000502971 RPL7P18124 248 aaKnown RBP17.04■□□□□ 0.32
PTPN13-205ENST00000502971 SRP14P37108 136 aaKnown RBP17.04■□□□□ 0.32
PTPN13-205ENST00000502971 RAB9AP51151 201 aa17.04■□□□□ 0.32
PTPN13-205ENST00000502971 TEX38Q6PEX7 206 aa17.04■□□□□ 0.32
PTPN13-205ENST00000502971 ATG101Q9BSB4 218 aa17.04■□□□□ 0.32
PTPN13-205ENST00000502971 FLNAP21333 2647 aaKnown RBP17.03■□□□□ 0.32
PTPN13-205ENST00000502971 TRBV24-1A0A075B6N3 115 aa17.03■□□□□ 0.32
PTPN13-205ENST00000502971 TGIF2-C20orf24A0A0A6YYL0 155 aa17.03■□□□□ 0.32
PTPN13-205ENST00000502971 LOC105371267A0A1B0GV96 52 aa17.03■□□□□ 0.32
PTPN13-205ENST00000502971 HNF1AP20823 631 aa17.03■□□□□ 0.32
PTPN13-205ENST00000502971 TMEM183BQ1AE95 376 aa17.03■□□□□ 0.32
PTPN13-205ENST00000502971 OR10G8Q8NGN5 311 aa17.03■□□□□ 0.32
PTPN13-205ENST00000502971 IMMP2LQ96T52 175 aa17.03■□□□□ 0.32
PTPN13-205ENST00000502971 CSPG4Q6UVK1 2322 aa17.03■□□□□ 0.32
PTPN13-205ENST00000502971 ZANQ9Y493 2812 aa17.02■□□□□ 0.32
PTPN13-205ENST00000502971 C1orf196B1AJZ1 125 aa17.02■□□□□ 0.32
PTPN13-205ENST00000502971 PF4V1P10720 104 aa17.02■□□□□ 0.32
PTPN13-205ENST00000502971 GNG5P63218 68 aa17.02■□□□□ 0.32
PTPN13-205ENST00000502971 FLI1Q01543 452 aaPredicted RBP17.02■□□□□ 0.32
PTPN13-205ENST00000502971 PDE6HQ13956 83 aa17.02■□□□□ 0.32
PTPN13-205ENST00000502971 KLF12Q9Y4X4 402 aa17.02■□□□□ 0.32
PTPN13-205ENST00000502971 IGHV3-35A0A0C4DH35 117 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 A0A0G2JLM5 398 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 GCGP01275 180 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.01■□□□□ 0.31
PTPN13-205ENST00000502971 HOXA3O43365 443 aaPredicted RBP17.01■□□□□ 0.31
PTPN13-205ENST00000502971 IGLV2-8P01709 118 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 TCRAP04437 139 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 RAB5BP61020 215 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 KCNIP4Q6PIL6 250 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 C1QL4Q86Z23 238 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 CMTM2Q8TAZ6 248 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 FAM210BQ96KR6 192 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 LINC00479Q96M42 142 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 PYGO2Q9BRQ0 406 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 PRSS22Q9GZN4 317 aa17.01■□□□□ 0.31
PTPN13-205ENST00000502971 TMEM89A2RUT3 159 aa17■□□□□ 0.31
PTPN13-205ENST00000502971 CD5LO43866 347 aa17■□□□□ 0.31
PTPN13-205ENST00000502971 ARL3P36405 182 aa17■□□□□ 0.31
PTPN13-205ENST00000502971 UBE2G1P62253 170 aa17■□□□□ 0.31
PTPN13-205ENST00000502971 OR8I2Q8N0Y5 310 aa17■□□□□ 0.31
PTPN13-205ENST00000502971 PPP5D1E7EU14 171 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 RPS10P46783 165 aaKnown RBP16.99■□□□□ 0.31
PTPN13-205ENST00000502971 SIGLEC15Q6ZMC9 328 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 EXOC3-AS1Q8N2X6 119 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 SMIM12Q96EX1 92 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 FMC1Q96HJ9 113 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 C17orf77Q96MU5 243 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 KLK15Q9H2R5 256 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 TRAV34A0A0B4J273 112 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 ISLRO14498 428 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 IGHG4P01861 327 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 BAGE2Q86Y30 109 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 GPR82Q96P67 336 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 METTL26Q96S19 204 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 NPFFR1Q9GZQ6 430 aa16.99■□□□□ 0.31
PTPN13-205ENST00000502971 OTOGQ6ZRI0 2925 aa16.98■□□□□ 0.31
PTPN13-205ENST00000502971 CLPSL1A2RUU4 121 aa16.98■□□□□ 0.31
PTPN13-205ENST00000502971 ERVFC1-1P60608 527 aa16.98■□□□□ 0.31
PTPN13-205ENST00000502971 PSG9Q00887 426 aa16.98■□□□□ 0.31
PTPN13-205ENST00000502971 RPH3ALQ9UNE2 315 aa16.98■□□□□ 0.31
PTPN13-205ENST00000502971 IGHV3OR16-8A0A075B7F1 116 aa16.97■□□□□ 0.31
PTPN13-205ENST00000502971 BUB3O43684 328 aa16.97■□□□□ 0.31
PTPN13-205ENST00000502971 GGCTO75223 188 aaKnown RBP16.97■□□□□ 0.31
PTPN13-205ENST00000502971 RPL15P61313 204 aaKnown RBP16.97■□□□□ 0.31
PTPN13-205ENST00000502971 FOXL1Q12952 345 aa16.97■□□□□ 0.31
PTPN13-205ENST00000502971 OR5I1Q13606 314 aa16.97■□□□□ 0.31
PTPN13-205ENST00000502971 C1orf194Q5T5A4 169 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms