RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 TAS2R60P59551 318 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 LYZP61626 148 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 SELENOTP62341 195 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 IL18Q14116 193 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 RNASE12Q5GAN4 147 aaKnown RBP4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 PXDC1Q5TGL8 231 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 ZNF493Q6ZR52 646 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 TMEM144Q7Z5S9 345 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 C6orf223Q8N319 242 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 BPIFCQ8NFQ6 507 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 OR11H7Q8NGC8 314 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 ZNRF2Q8NHG8 242 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 DYNC2LI1Q8TCX1 351 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 C16orf74Q96GX8 76 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 DIRAS2Q96HU8 199 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 C16orf92Q96LL3 132 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 SLC25A21Q9BQT8 299 aaPredicted RBP4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 UPK3BQ9BT76 320 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 NAA50Q9GZZ1 169 aaKnown RBP4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 SLC25A32Q9H2D1 315 aa4.29□□□□□ -1.72
LSM3P4-201ENST00000502948 IGHV3OR16-12A0A075B7B8 117 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 TRAV8-2A0A0B4J237 113 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 F6UB75 175 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 H3BRN7 92 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 SYNGR2O43760 224 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 IGKV3-20P01619 116 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 ATP5G1P05496 136 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 ATP5G3P48201 142 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 TMBIM6P55061 237 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 FXYD7P58549 80 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 AP3S2P59780 193 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 UBE2MP61081 183 aaKnown RBP4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 ID3Q02535 119 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 TTC32Q5I0X7 151 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 TMEM263Q8WUH6 116 aaKnown RBP4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 PPP1R14BQ96C90 147 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 C20orf173Q96LM9 149 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 C18orf15Q96N68 181 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 SHANK2-AS3Q9BTD1 123 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 TMEM208Q9BTX3 173 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 RSG1Q9BU20 258 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 TMEM147Q9BVK8 224 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 MRPS26Q9BYN8 205 aaKnown RBP4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 PLA2G2EQ9NZK7 142 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
LSM3P4-201ENST00000502948 IGLV2-18A0A075B6J9 118 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 PMS2P5A8MQ11 134 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 C16orf90A8MZG2 172 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 BOLA2-SMG1P6H3BVE0 249 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 H7BYZ3 331 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 ADAP1O75689 374 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 CXCL3P19876 107 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 CDKN1BP46527 198 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 DEFB1P60022 68 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 POLR2GP62487 172 aaKnown RBP eCLIP4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 SPCS2Q15005 226 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 ZNF575Q86XF7 245 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 OR10J6PQ8NGY7 276 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 RNASE8Q8TDE3 154 aaKnown RBP4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 TRIM63Q969Q1 353 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 SLC50A1Q9BRV3 221 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 ATG101Q9BSB4 218 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 KRTAP4-5Q9BYR2 181 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 SLC25A39Q9BZJ4 359 aaPredicted RBP4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 SLIRPQ9GZT3 109 aaKnown RBP4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 NPVFQ9HCQ7 196 aa4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 TIMM8BQ9Y5J9 83 aaPredicted RBP4.27□□□□□ -1.73
LSM3P4-201ENST00000502948 FABP12A6NFH5 140 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 MRPS12O15235 138 aaKnown RBP4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 SFT2D2O95562 160 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 ORM2P19652 201 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 TNFSF8P32971 234 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 TAS2R30P59541 319 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 RAP2BP61225 183 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 TNP2Q05952 138 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 OR2F1Q13607 317 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 PSG3Q16557 428 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 SPINK13Q1W4C9 94 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 LCN15Q6UWW0 184 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 TMEM182Q6ZP80 229 aaPredicted RBP4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 CYP2G1PQ6ZSU1 146 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 CCDC190Q86UF4 302 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 Q8N1X5 172 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 OR8A1Q8NGG7 326 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 SMIM8Q96KF7 97 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 ODF3Q96PU9 254 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 GGACTQ9BVM4 153 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 Q9H3A6 140 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 Q9H8V8 135 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 SLC25A22Q9H936 323 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 MCUBQ9NWR8 336 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 HIGD1AQ9Y241 93 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 STRAPQ9Y3F4 350 aaKnown RBP4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 LINC00588Q9Y4M8 146 aa4.26□□□□□ -1.73
LSM3P4-201ENST00000502948 ZNF705GA8MUZ8 300 aaPredicted RBP4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 K7EP13 123 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 M0R2Z0 102 aa4.25□□□□□ -1.73
LSM3P4-201ENST00000502948 HYPMO75409 117 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms