RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 HIST1H1EP10412 219 aaKnown RBP10.34□□□□□ -0.75
SGCA-203ENST00000502555 REC114Q7Z4M0 266 aa10.34□□□□□ -0.75
SGCA-203ENST00000502555 OR4F17Q8NGA8 305 aa10.34□□□□□ -0.75
SGCA-203ENST00000502555 RXFP4Q8TDU9 374 aa10.34□□□□□ -0.75
SGCA-203ENST00000502555 OR4F4Q96R69 305 aa10.34□□□□□ -0.75
SGCA-203ENST00000502555 DAZ1Q9NQZ3 744 aaKnown RBP10.34□□□□□ -0.75
SGCA-203ENST00000502555 UFC1Q9Y3C8 167 aa10.34□□□□□ -0.75
SGCA-203ENST00000502555 TSSC4Q9Y5U2 329 aaPredicted RBP10.34□□□□□ -0.75
SGCA-203ENST00000502555 IGHV4OR15-8A0A075B7B6 117 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 A0A087WW49 117 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 TMEM218A2RU14 115 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 FAM74A7A6NL05 159 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 C9JQL5 133 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 HAX1O00165 279 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 LGALS9O00182 355 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 MRPS12O15235 138 aaKnown RBP10.33□□□□□ -0.76
SGCA-203ENST00000502555 BUB3O43684 328 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 NBEAP1P0C6P0 100 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 CD28P10747 220 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 OR8I2Q8N0Y5 310 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 KLHL30-AS1Q8NEE0 82 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 NKX6-2Q9C056 277 aaPredicted RBP10.33□□□□□ -0.76
SGCA-203ENST00000502555 SLC35B3Q9H1N7 401 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 YTHDF2Q9Y5A9 579 aaKnown RBP10.33□□□□□ -0.76
SGCA-203ENST00000502555 A0A1W2PS18 150 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 ZNF320A2RRD8 509 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 A8MWP6 167 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 C11orf94C9JXX5 98 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 LINC01619G3V211 115 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 PDE6DO43924 150 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 SRP19P09132 144 aaKnown RBP10.33□□□□□ -0.76
SGCA-203ENST00000502555 SFTA3P0C7M3 94 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 IGLC2P0DOY2 106 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 HOXD3P31249 432 aaPredicted RBP10.33□□□□□ -0.76
SGCA-203ENST00000502555 BMI1P35226 326 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 CD81P60033 236 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 UBE2G2P60604 165 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 SRSF2Q01130 221 aaKnown RBP10.33□□□□□ -0.76
SGCA-203ENST00000502555 CST9LP1Q5W188 147 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 C18orf65Q6ZTR6 163 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 C1QL4Q86Z23 238 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 DPF1Q92782 380 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 GRAMD2BQ96HH9 432 aa10.33□□□□□ -0.76
SGCA-203ENST00000502555 CITED2Q99967 270 aaPredicted RBP10.33□□□□□ -0.76
SGCA-203ENST00000502555 F6UZH7 168 aa10.32□□□□□ -0.76
SGCA-203ENST00000502555 TMEM250H0YL14 139 aa10.32□□□□□ -0.76
SGCA-203ENST00000502555 ZNF207O43670 478 aaKnown RBP10.32□□□□□ -0.76
SGCA-203ENST00000502555 GALR1P47211 349 aa10.32□□□□□ -0.76
SGCA-203ENST00000502555 FOXL1Q12952 345 aa10.32□□□□□ -0.76
SGCA-203ENST00000502555 PDE6HQ13956 83 aa10.32□□□□□ -0.76
SGCA-203ENST00000502555 OR1N2Q8NGR9 330 aa10.32□□□□□ -0.76
SGCA-203ENST00000502555 TCEAL7Q9BRU2 100 aa10.32□□□□□ -0.76
SGCA-203ENST00000502555 TRBV19A0A075B6N1 114 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 A0A087X0K7 114 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 IGHV7-4-1A0A0J9YVY3 117 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 H3BQ15 152 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 ATP5G3P48201 142 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 MEOX2P50222 304 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 KLF5Q13887 457 aaPredicted RBP10.31□□□□□ -0.76
SGCA-203ENST00000502555 C2CD3Q4AC94 2353 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 C16orf54Q6UWD8 224 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 OR11H1Q8NG94 326 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 GLMPQ8WWB7 406 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 ELOVL1Q9BW60 279 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 ZNF586Q9NXT0 402 aa10.31□□□□□ -0.76
SGCA-203ENST00000502555 TMEM213A2RRL7 107 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 GGTLC3B5MD39 225 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 ZNF253O75346 499 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 APOHP02749 345 aaPredicted RBP10.3□□□□□ -0.76
SGCA-203ENST00000502555 ATF4P18848 351 aaPredicted RBP10.3□□□□□ -0.76
SGCA-203ENST00000502555 SYNJ2BPP57105 145 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 FHL3Q13643 280 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 TM4SF20Q53R12 229 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 C8orf86Q6ZUL3 223 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 CCDC28AQ8IWP9 274 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 LYPD1Q8N2G4 141 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.3□□□□□ -0.76
SGCA-203ENST00000502555 C11orf44Q8N8P7 122 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 CYB561D1Q8N8Q1 229 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 BLNKQ8WV28 456 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 C11orf52Q96A22 123 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 LINC00052Q96N35 136 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 SEC11CQ9BY50 192 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 SMPXQ9UHP9 88 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 ZFHX3Q15911 3703 aa10.3□□□□□ -0.76
SGCA-203ENST00000502555 IGHV3-49A0A0A0MS15 119 aa10.29□□□□□ -0.76
SGCA-203ENST00000502555 F8W036 122 aa10.29□□□□□ -0.76
SGCA-203ENST00000502555 MYCNOSP40205 109 aa10.29□□□□□ -0.76
SGCA-203ENST00000502555 SOHLH1Q5JUK2 328 aa10.29□□□□□ -0.76
SGCA-203ENST00000502555 C10orf91Q5T1B1 145 aa10.29□□□□□ -0.76
SGCA-203ENST00000502555 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
SGCA-203ENST00000502555 RHPN1-AS1Q9BWJ2 59 aa10.29□□□□□ -0.76
SGCA-203ENST00000502555 OTORQ9NRC9 128 aa10.29□□□□□ -0.76
SGCA-203ENST00000502555 CARHSP1Q9Y2V2 147 aaKnown RBP10.29□□□□□ -0.76
SGCA-203ENST00000502555 IGHV3-66A0A0C4DH42 116 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 A0A1W2PRX2 142 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 HELTA6NFD8 242 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 ZNF785A8K8V0 405 aa10.28□□□□□ -0.76
SGCA-203ENST00000502555 CCL24O00175 119 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms