RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 BCL2L15Q5TBC7 163 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 C22orf39Q6P5X5 142 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 Q6ZQY7 126 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 C12orf45Q8N5I9 185 aaPredicted RBP-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 STAG3L4Q8TBR4 150 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 RAB37Q96AX2 223 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 TRIM4Q9C037 500 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 TMEM133Q9H2Q1 129 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 TCEAL2Q9H3H9 227 aaPredicted RBP-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 UQCC1Q9NVA1 299 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 GLTPQ9NZD2 209 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 HSPB8Q9UJY1 196 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 BCORL1Q5H9F3 1711 aa-0.18□□□□□ -2.44
SMAD1-203ENST00000502342 PTPRFP10586 1907 aa-0.19□□□□□ -2.44
SMAD1-203ENST00000502342 SMIM23A6NLE4 172 aa-0.19□□□□□ -2.44
SMAD1-203ENST00000502342 C17orf112F2Z3M2 114 aa-0.19□□□□□ -2.44
SMAD1-203ENST00000502342 KPNA3O00505 521 aaPredicted RBP-0.19□□□□□ -2.44
SMAD1-203ENST00000502342 OMPP47874 163 aa-0.19□□□□□ -2.44
SMAD1-203ENST00000502342 OR5AS1Q8N127 324 aa-0.19□□□□□ -2.44
SMAD1-203ENST00000502342 DDI1Q8WTU0 396 aa-0.19□□□□□ -2.44
SMAD1-203ENST00000502342 TMEM126AQ9H061 195 aa-0.19□□□□□ -2.44
SMAD1-203ENST00000502342 RNF122Q9H9V4 155 aa-0.19□□□□□ -2.44
SMAD1-203ENST00000502342 SPTBP11277 2137 aa-0.19□□□□□ -2.44
SMAD1-203ENST00000502342 PIK3C2GO75747 1445 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 B4DSR2 109 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 GPR31O00270 319 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 PDE6DO43924 150 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 PIGPP57054 158 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 RANP62826 216 aaKnown RBP-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 C1orf134Q5TEV5 83 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 TRAPPC5Q8IUR0 188 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 OR51A2Q8NGJ7 313 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 OR10AG1Q8NH19 301 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 PLAC4Q8WY50 150 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 CCDC42Q96M95 316 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 RNASE7Q9H1E1 156 aaKnown RBP-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 MGAMO43451 1857 aa-0.2□□□□□ -2.44
SMAD1-203ENST00000502342 NCOA1Q15788 1441 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 ERBINQ96RT1 1412 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 MACF1Q9UPN3 7388 aaKnown RBP-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 KIF1BO60333 1816 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 CST8O60676 142 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 FREM3P0C091 2139 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 ERP29P30040 261 aaKnown RBP-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 FXYD4P59646 89 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 UBE2BP63146 152 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 RRN3P1Q2M238 152 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 POP5Q969H6 163 aaKnown RBP-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 CCL19Q99731 98 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 CCDC94Q9BW85 323 aaPredicted RBP-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 MYLKQ15746 1914 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 FMN1Q68DA7 1419 aa-0.21□□□□□ -2.44
SMAD1-203ENST00000502342 HIVEP3Q5T1R4 2406 aa-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 A0A087WUJ7 227 aa-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 OR7C1O76099 320 aaPredicted RBP-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 OR10J4P0C629 311 aa-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 VBP1P61758 197 aa-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 OCIAD2Q56VL3 154 aa-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 EIF5AL1Q6IS14 154 aaKnown RBP-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 ARPINQ7Z6K5 226 aa-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 PRR15Q8IV56 129 aa-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 BOKQ9UMX3 212 aaPredicted RBP-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 PRELID3BQ9Y3B1 194 aa-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 ARL5AQ9Y689 179 aa-0.22□□□□□ -2.44
SMAD1-203ENST00000502342 ABCA12Q86UK0 2595 aa-0.22□□□□□ -2.45
SMAD1-203ENST00000502342 TTC28Q96AY4 2481 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 UBR5O95071 2799 aaPredicted RBP-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 A0A087WSZ3 146 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 GGCTO75223 188 aaKnown RBP-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 LYPLA2O95372 231 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 SERPINB9P50453 376 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 RPL37AP61513 92 aaKnown RBP-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 HIST1H3AP68431 136 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 H3F3AP84243 136 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 EDDM3AQ14507 147 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 IMPG1Q17R60 797 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 S100A7AQ86SG5 101 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 OR5D16Q8NGK9 328 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 GNPDA2Q8TDQ7 276 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 NPCDR1Q9BY65 106 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 RFX7Q2KHR2 1363 aa-0.23□□□□□ -2.45
SMAD1-203ENST00000502342 TRAV27A0A087WT01 109 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 A0A096LPI6 279 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 TRAV4A0A0B4J268 109 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 FAM159BA6NKW6 160 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 TMEM256-PLSCR3K7ERE1 68 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 TAX1BP3O14907 124 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 RPP14O95059 124 aaKnown RBP-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 SPINK1P00995 79 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 RPS17P08708 135 aaKnown RBP-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 RAB5CP51148 216 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 CEBPGP53567 150 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 EIF3IQ13347 325 aaKnown RBP-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 OR4K15Q8NH41 348 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 COL24A1Q17RW2 1714 aa-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 MYO5AQ9Y4I1 1855 aaKnown RBP-0.24□□□□□ -2.45
SMAD1-203ENST00000502342 TRBV19A0A075B6N1 114 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 IFNA7P01567 189 aa-0.25□□□□□ -2.45
SMAD1-203ENST00000502342 IGLV1-51P01701 117 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms