RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 CHAC2Q8WUX2 184 aa12.41□□□□□ -0.42
PRKCB-210ENST00000498739 TM2D3Q9BRN9 247 aa12.41□□□□□ -0.42
PRKCB-210ENST00000498739 WDR61Q9GZS3 305 aaKnown RBP12.41□□□□□ -0.42
PRKCB-210ENST00000498739 SLC39A9Q9NUM3 307 aa12.41□□□□□ -0.42
PRKCB-210ENST00000498739 ELOA3CA0A087WX78 387 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-210ENST00000498739 OR1L4Q8NGR5 311 aa12.4□□□□□ -0.42
PRKCB-210ENST00000498739 OR2T35Q8NGX2 323 aa12.4□□□□□ -0.42
PRKCB-210ENST00000498739 TMEM37Q8WXS4 190 aa12.4□□□□□ -0.42
PRKCB-210ENST00000498739 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
PRKCB-210ENST00000498739 RSG1Q9BU20 258 aa12.4□□□□□ -0.42
PRKCB-210ENST00000498739 RNF24Q9Y225 148 aa12.4□□□□□ -0.42
PRKCB-210ENST00000498739 U3KQK5 164 aa12.4□□□□□ -0.42
PRKCB-210ENST00000498739 IFNA5P01569 189 aa12.39□□□□□ -0.43
PRKCB-210ENST00000498739 RPL7P18124 248 aaKnown RBP12.39□□□□□ -0.43
PRKCB-210ENST00000498739 ID1P41134 155 aa12.39□□□□□ -0.43
PRKCB-210ENST00000498739 MEOX2P50222 304 aa12.39□□□□□ -0.43
PRKCB-210ENST00000498739 APOC4P55056 127 aa12.39□□□□□ -0.43
PRKCB-210ENST00000498739 ZNF709Q8N972 641 aa12.39□□□□□ -0.43
PRKCB-210ENST00000498739 RCHY1Q96PM5 261 aa12.39□□□□□ -0.43
PRKCB-210ENST00000498739 PFDN5Q99471 154 aa12.39□□□□□ -0.43
PRKCB-210ENST00000498739 SEPSECSQ9HD40 501 aaKnown RBP12.39□□□□□ -0.43
PRKCB-210ENST00000498739 DNAJC4Q9NNZ3 241 aa12.39□□□□□ -0.43
PRKCB-210ENST00000498739 FXYD6-FXYD2A0A087WZ82 144 aa12.38□□□□□ -0.43
PRKCB-210ENST00000498739 C17orf112F2Z3M2 114 aa12.38□□□□□ -0.43
PRKCB-210ENST00000498739 SOCS3O14543 225 aa12.38□□□□□ -0.43
PRKCB-210ENST00000498739 ATF4P18848 351 aaPredicted RBP12.38□□□□□ -0.43
PRKCB-210ENST00000498739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.38□□□□□ -0.43
PRKCB-210ENST00000498739 SCGB1C1Q8TD33 95 aa12.38□□□□□ -0.43
PRKCB-210ENST00000498739 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
PRKCB-210ENST00000498739 LINC00052Q96N35 136 aa12.38□□□□□ -0.43
PRKCB-210ENST00000498739 AQP10Q96PS8 301 aa12.38□□□□□ -0.43
PRKCB-210ENST00000498739 RETNQ9HD89 108 aa12.38□□□□□ -0.43
PRKCB-210ENST00000498739 KCNIP2Q9NS61 270 aa12.38□□□□□ -0.43
PRKCB-210ENST00000498739 KNCNA6PVL3 124 aa12.37□□□□□ -0.43
PRKCB-210ENST00000498739 PSMB3P49720 205 aa12.37□□□□□ -0.43
PRKCB-210ENST00000498739 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
PRKCB-210ENST00000498739 MORN5Q5VZ52 161 aa12.37□□□□□ -0.43
PRKCB-210ENST00000498739 STHQ8IWL8 128 aa12.37□□□□□ -0.43
PRKCB-210ENST00000498739 C17orf77Q96MU5 243 aa12.37□□□□□ -0.43
PRKCB-210ENST00000498739 WFDC1Q9HC57 220 aa12.37□□□□□ -0.43
PRKCB-210ENST00000498739 TGP01266 2768 aa12.36□□□□□ -0.43
PRKCB-210ENST00000498739 ISLRO14498 428 aa12.36□□□□□ -0.43
PRKCB-210ENST00000498739 GCSAMLQ5JQS6 135 aa12.36□□□□□ -0.43
PRKCB-210ENST00000498739 ACTL10Q5JWF8 245 aa12.36□□□□□ -0.43
PRKCB-210ENST00000498739 BPIFA4PQ86YQ2 179 aa12.36□□□□□ -0.43
PRKCB-210ENST00000498739 INO80EQ8NBZ0 244 aaPredicted RBP12.36□□□□□ -0.43
PRKCB-210ENST00000498739 GATAD1Q8WUU5 269 aa12.36□□□□□ -0.43
PRKCB-210ENST00000498739 TRAV5A0A0B4J249 113 aa12.35□□□□□ -0.43
PRKCB-210ENST00000498739 KIR2DL5BA0A0G2JN68 375 aa12.35□□□□□ -0.43
PRKCB-210ENST00000498739 KIR2DL5BA0A0G2JPC4 375 aa12.35□□□□□ -0.43
PRKCB-210ENST00000498739 MRPS12O15235 138 aaKnown RBP12.35□□□□□ -0.43
PRKCB-210ENST00000498739 KIR2DL5AQ8N109 375 aa12.35□□□□□ -0.43
PRKCB-210ENST00000498739 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
PRKCB-210ENST00000498739 TNFSF18Q9UNG2 199 aa12.35□□□□□ -0.43
PRKCB-210ENST00000498739 A0A087X0K7 114 aa12.34□□□□□ -0.43
PRKCB-210ENST00000498739 G3V3Q6 166 aa12.34□□□□□ -0.43
PRKCB-210ENST00000498739 SMLR1H3BR10 107 aa12.34□□□□□ -0.43
PRKCB-210ENST00000498739 UBE2CO00762 179 aa12.34□□□□□ -0.43
PRKCB-210ENST00000498739 SNRPCP09234 159 aaKnown RBP12.34□□□□□ -0.43
PRKCB-210ENST00000498739 TRPT1Q86TN4 253 aaKnown RBP12.34□□□□□ -0.43
PRKCB-210ENST00000498739 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
PRKCB-210ENST00000498739 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
PRKCB-210ENST00000498739 CSTL1Q9H114 145 aa12.34□□□□□ -0.43
PRKCB-210ENST00000498739 HUWE1Q7Z6Z7 4374 aaKnown RBP12.33□□□□□ -0.44
PRKCB-210ENST00000498739 RNF222A6NCQ9 220 aa12.33□□□□□ -0.44
PRKCB-210ENST00000498739 DEFB1P60022 68 aa12.33□□□□□ -0.44
PRKCB-210ENST00000498739 ZNF266Q14584 549 aa12.33□□□□□ -0.44
PRKCB-210ENST00000498739 DEFB135Q30KP9 77 aa12.33□□□□□ -0.44
PRKCB-210ENST00000498739 FFAR4Q5NUL3 377 aa12.33□□□□□ -0.44
PRKCB-210ENST00000498739 FAM78BQ5VT40 261 aa12.33□□□□□ -0.44
PRKCB-210ENST00000498739 IGFL4Q6B9Z1 124 aa12.33□□□□□ -0.44
PRKCB-210ENST00000498739 C20orf173Q96LM9 149 aa12.33□□□□□ -0.44
PRKCB-210ENST00000498739 TRAV8-2A0A0B4J237 113 aa12.32□□□□□ -0.44
PRKCB-210ENST00000498739 CA1P00915 261 aaPredicted RBP12.32□□□□□ -0.44
PRKCB-210ENST00000498739 Q6ZWC4 215 aa12.32□□□□□ -0.44
PRKCB-210ENST00000498739 RPRMQ9NS64 109 aa12.32□□□□□ -0.44
PRKCB-210ENST00000498739 COL7A1Q02388 2944 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 H3BTX0 84 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 ARPC5O15511 151 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 HLA-DRB4P13762 266 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 GDF5OSQ5U4N7 250 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 SPATA31B1PQ5VZV4 182 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 LCN15Q6UWW0 184 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 Q6ZNX1 250 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 FOXI2Q6ZQN5 318 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 MIR17HGQ75NE6 70 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 RNF182Q8N6D2 247 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 HSD17B11Q8NBQ5 300 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 OVOL2Q9BRP0 275 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 SAV1Q9H4B6 383 aaPredicted RBP12.31□□□□□ -0.44
PRKCB-210ENST00000498739 RFNGQ9Y644 331 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 HLA-DRB4X5D2U9 266 aa12.31□□□□□ -0.44
PRKCB-210ENST00000498739 F6UB75 175 aa12.3□□□□□ -0.44
PRKCB-210ENST00000498739 H3BMM0 161 aa12.3□□□□□ -0.44
PRKCB-210ENST00000498739 SPRY2O43597 315 aa12.3□□□□□ -0.44
PRKCB-210ENST00000498739 IGLC2P0DOY2 106 aa12.3□□□□□ -0.44
PRKCB-210ENST00000498739 SPP1P10451 314 aa12.3□□□□□ -0.44
PRKCB-210ENST00000498739 CXCL2P19875 107 aa12.3□□□□□ -0.44
PRKCB-210ENST00000498739 EBLN2Q6P2I7 272 aa12.3□□□□□ -0.44
PRKCB-210ENST00000498739 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms