RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SAMD5Q5TGI4 173 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 MKXQ8IYA7 352 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR11H1Q8NG94 326 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR11H2Q8NH07 326 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 LSM10Q969L4 123 aaKnown RBP4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 VKORC1Q9BQB6 163 aa4.69□□□□□ -1.66
SOX2-OT-218ENST00000498731 TENM4Q6N022 2769 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 PRRG2O14669 202 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZG16O60844 167 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR2J3O76001 311 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 CRYGBP07316 175 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 COX8AP10176 69 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZNF718Q3SXZ3 478 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZNF418Q8TF45 676 aaPredicted RBP4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 AP1S3Q96PC3 154 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 BBC3Q96PG8 261 aaPredicted RBP4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 PKIBQ9C010 78 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 KCNS2Q9ULS6 477 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 TNRC6BQ9UPQ9 1833 aaKnown RBP4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 A0A1W2PRE2 83 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 MBD3L4A6NDZ8 208 aaPredicted RBP4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 MBD3L3A6NE82 208 aaPredicted RBP4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 CD300LBA8K4G0 201 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 CRXO43186 299 aaPredicted RBP4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 IGHV3-7P01780 117 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 HOXA4Q00056 320 aaPredicted RBP4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 LOXL1Q08397 574 aaPredicted RBP4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR8B8Q15620 311 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 TBC1D28Q2M2D7 210 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 SFTA2Q6UW10 78 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 OSR2Q8N2R0 312 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 RPRMLQ8N4K4 120 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 C9orf106Q8NAJ2 232 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZNF391Q9UJN7 358 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 M0R1B8 84 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 LTAP01374 205 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 CSN3P07498 182 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 KIR2DL2P43627 348 aaPredicted RBP4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 SMCPP49901 116 aaPredicted RBP4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 BPIFA4PQ86YQ2 179 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR9G4Q8NGQ1 327 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZNF355PQ9NSJ1 428 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 VPREB3Q9UKI3 123 aa4.68□□□□□ -1.66
SOX2-OT-218ENST00000498731 A0A087WX48 190 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 SYNGR1O43759 233 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 C5orf47Q569G3 176 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 MIC13Q5XKP0 118 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 CCDC71LQ8N9Z2 235 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR10X1Q8NGY0 326 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 SSMEM1Q8WWF3 244 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 GPR82Q96P67 336 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 KCNIP2Q9NS61 270 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 PROCRQ9UNN8 238 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 TFF1P04155 84 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 F2RP25116 425 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZNF137PP52743 207 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 MFAP2P55001 183 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 ERVK11-1P61568 191 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 GAGE5Q13069 117 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 GAGE6Q13070 117 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 EFNB3Q15768 340 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 TMEM14EPQ6UXP3 125 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 Q6ZUT4 128 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 PHLDA1Q8WV24 401 aaPredicted RBP4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 VGLL1Q99990 258 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 ANAPC13Q9BS18 74 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 PRO0461Q9UI25 63 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 HSPB8Q9UJY1 196 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZNF257Q9Y2Q1 563 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 TEX15Q9BXT5 2789 aa4.67□□□□□ -1.66
SOX2-OT-218ENST00000498731 LOC107984640A0A0U1RRK4 108 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 CRYGSP22914 178 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 IGHV1-2P23083 117 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 PCSK4Q6UW60 755 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZNF826PQ6ZT77 177 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 DEFB108BQ8NET1 73 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 FOXA2Q9Y261 457 aaPredicted RBP4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 TNCP24821 2201 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 HIVEP3Q5T1R4 2406 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 IGKV2D-26A0A0A0MRZ7 120 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 LEPROTL1O95214 131 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 RBP4P02753 201 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 G6PCP35575 357 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 TEPPQ6URK8 271 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 NUP35Q8NFH5 326 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 OR5A2Q8NGI9 324 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 MAP1LC3CQ9BXW4 147 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 GCM1Q9NP62 436 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 FNDC10F2Z333 226 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 IGHV3-13P01766 116 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 HBZP02008 142 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 FABP2P12104 132 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 COX5AP20674 150 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 PRR20EP86478 221 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 PRR20CP86479 221 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 PRR20DP86480 221 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 PRR20BP86481 221 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 PRR20AP86496 221 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 EDDM3AQ14507 147 aa4.66□□□□□ -1.66
SOX2-OT-218ENST00000498731 ZNF146Q15072 292 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 940.8 ms