RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, human

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNC-208	ENST00000498724		A0A087X0K7	114 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724		A0A1B0GW15	77 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	FAM231B	A6NCW3	169 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724		A6NDN8	102 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	VWC2L	B2RUY7	222 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	LTA	P01374	205 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	IGHV3-48	P01763	117 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	TCRA	P04437	139 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	COX8A	P10176	69 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	GLRX	P35754	106 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	CSN1S1	P47710	185 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	SEC11A	P67812	179 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	KLRB1	Q12918	225 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	MSMP	Q1L6U9	139 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	VMA21	Q3ZAQ7	101 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	TMEM97	Q5BJF2	176 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	C10orf55	Q5SWW7	151 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	LINC01545	Q5VT33	79 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	DUX4L9	Q6RFH8	374 aa	Predicted RBP	3.57	□□□□□ -1.84
TNC-208	ENST00000498724	ZNF788	Q6ZQV5	615 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	GTF2H5	Q6ZYL4	71 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	ZCCHC24	Q8N2G6	241 aa	Known RBP	3.57	□□□□□ -1.84
TNC-208	ENST00000498724	FAM216B	Q8N7L0	139 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	OR5AN1	Q8NGI8	311 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	OR10AG1	Q8NH19	301 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	TMEM190	Q8WZ59	177 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	TRGV9	Q99603	122 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	PRSS22	Q9GZN4	317 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724		Q9H3A6	140 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	FNDC4	Q9H6D8	234 aa	Predicted RBP	3.57	□□□□□ -1.84
TNC-208	ENST00000498724	LINC00574	Q9H8X3	128 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	OTOR	Q9NRC9	128 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	PLSCR4	Q9NRQ2	329 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	ZNRD1	Q9P1U0	126 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	LINC00312	Q9Y6C7	94 aa		3.57	□□□□□ -1.84
TNC-208	ENST00000498724	TRAV8-6	A0A0B4J262	113 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	TRBV6-1	A0A0K0K1D8	114 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724		A0A1B0GUT8	65 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	C7orf71	A4D174	169 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	GAGE10	A6NGK3	116 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724		H3BTX0	84 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	SMAD7	O15105	426 aa	Known RBP	3.56	□□□□□ -1.84
TNC-208	ENST00000498724	FSTL3	O95633	263 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	IGHV1-46	P01743	117 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	APOH	P02749	345 aa	Predicted RBP	3.56	□□□□□ -1.84
TNC-208	ENST00000498724	CSN3	P07498	182 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	IGLC1	P0CG04	106 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	GP9	P14770	177 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	GNLY	P22749	145 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	CD24	P25063	80 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	CCL11	P51671	97 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	ZNF138	P52744	262 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	WT1-AS	Q06250	92 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	MEF2C	Q06413	473 aa	Predicted RBP	3.56	□□□□□ -1.84
TNC-208	ENST00000498724	HSD52	Q0P140	79 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	FAM71F2	Q6NXP2	309 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	LINC00322	Q6ZN03	302 aa	Predicted RBP	3.56	□□□□□ -1.84
TNC-208	ENST00000498724	C2orf91	Q6ZV80	131 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	GOLT1A	Q6ZVE7	132 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	PRNT	Q86SH4	94 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	GATD1	Q8NB37	220 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	OR4C13	Q8NGP0	309 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	PRSS3P2	Q8NHM4	247 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	MCRIP2	Q9BUT9	160 aa	Known RBP	3.56	□□□□□ -1.84
TNC-208	ENST00000498724	MLST8	Q9BVC4	326 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	AP5S1	Q9NUS5	200 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	MRPL36	Q9P0J6	103 aa	Known RBP	3.56	□□□□□ -1.84
TNC-208	ENST00000498724	HIGD1A	Q9Y241	93 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	HECTD1	Q9ULT8	2610 aa		3.56	□□□□□ -1.84
TNC-208	ENST00000498724	DNAJC13	O75165	2243 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	CACNA1D	Q01668	2161 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	DOCK7	Q96N67	2140 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	IGLV3-9	A0A075B6K5	115 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	TRAV17	A0A0B4J275	112 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724		A0A1W2PPI3	338 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	GAGE12B	A1L429	117 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724		A1L4Q6	167 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	C9orf118	A6NHY6	69 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	CGB1	A6NKQ9	187 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	C22orf46	C9J442	243 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724		E7EUB6	86 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	NPIPB6	E9PJ23	425 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724		H3BRM9	83 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724		K7EP34	96 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724		K7EQM0	130 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	ENSA	O43768	121 aa	Known RBP	3.55	□□□□□ -1.84
TNC-208	ENST00000498724	SLC25A17	O43808	307 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	IGLV2-23	P01705	113 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	CRYGC	P07315	174 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	CCL3L1	P16619	93 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	MC5R	P33032	325 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	RPL27A	P46776	148 aa	Known RBP	3.55	□□□□□ -1.84
TNC-208	ENST00000498724	UQCRFS1	P47985	274 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	LYZ	P61626	148 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	C3orf36	Q3SXR2	165 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	TIMM23B	Q5SRD1	257 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	TEX36	Q5VZQ5	186 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724		Q6AWC8	147 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	HCP5	Q6MZN7	132 aa		3.55	□□□□□ -1.84
TNC-208	ENST00000498724	C16orf54	Q6UWD8	224 aa		3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms