RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 IGLL5B9A064 214 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 FNDC10F2Z333 226 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 F6UB75 175 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 H3BRN7 92 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 TSC22D2O75157 780 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 TCRBP04435 133 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 LINC00869P0C866 280 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 ZNF705DP0CH99 300 aaPredicted RBP6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 ZNF705BP0CI00 300 aaPredicted RBP6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 HLA-DMBP28068 263 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 RAP2BP61225 183 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 SELENOTP62341 195 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 FAM78BQ5VT40 261 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 ZNF705AQ6ZN79 300 aaPredicted RBP6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 Q6ZTC4 211 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 Q8N3U1 123 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 ZNF709Q8N972 641 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 NEU1Q99519 415 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 RSG1Q9BU20 258 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 SCRT1Q9BWW7 348 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 SLC25A39Q9BZJ4 359 aaPredicted RBP6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 SLC35B3Q9H1N7 401 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 NPVFQ9HCQ7 196 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 DOK5Q9P104 306 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 MGAT4CQ9UBM8 478 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 CELA1Q9UNI1 258 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 HIGD1AQ9Y241 93 aa6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 RCL1Q9Y2P8 373 aaKnown RBP6.11□□□□□ -1.43
HMGXB4-207ENST00000498212 EPPK1P58107 5090 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 TRAV6A0A075B6T7 132 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 IGHV3OR16-12A0A075B7B8 117 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 C7orf66A4D0T2 115 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 SMIM9A6NGZ8 99 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 CCSO14618 274 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 HYPMO75409 117 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 DEDDO75618 318 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 MBPP02686 304 aaPredicted RBP6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 OR5G3P0C626 314 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 PLP1P60201 277 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 PSG9Q00887 426 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 FGL1Q08830 312 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 ZNF846Q147U1 533 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 TEPPQ6URK8 271 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 S100A7AQ86SG5 101 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 RPP25LQ8N5L8 163 aaKnown RBP6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 C20orf173Q96LM9 149 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 C17orf77Q96MU5 243 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 UHRF2Q96PU4 802 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 SHANK2-AS3Q9BTD1 123 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 CCDC32Q9BV29 185 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 KRTAP9-2Q9BYQ4 174 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 NUDT15Q9NV35 164 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 APLNQ9ULZ1 77 aa6.1□□□□□ -1.43
HMGXB4-207ENST00000498212 IGHV4-4A0A075B6R2 117 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 TMEM189A5PLL7 270 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 C5orf51A6NDU8 294 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 A8MTW9 85 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 FAM25EA8MYX2 175 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 L7N2F9 121 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 RPL7P18124 248 aaKnown RBP6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 VAMP2P63027 116 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 SLC38A11Q08AI6 406 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 C12orf74Q32Q52 190 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 ZNF767PQ75MW2 155 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 ZNF431Q8TF32 576 aaPredicted RBP6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 SEC22CQ9BRL7 303 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 ARL6Q9H0F7 186 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 GOLT1BQ9Y3E0 138 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 LSM5Q9Y4Y9 91 aaKnown RBP6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 RFNGQ9Y644 331 aa6.09□□□□□ -1.43
HMGXB4-207ENST00000498212 DEFB131BA0A096LNP1 70 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 KRTAP9-6A0A140TA67 174 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 FAM240BA0A1B0GVZ2 78 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 K7EPK0 472 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 GOSR2O14653 212 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 AGPAT2O15120 278 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 DUSP14O95147 198 aaKnown RBP6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 H2AFB2P0C5Z0 115 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 SPART-AS1P0CW21 52 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 BCAP31P51572 246 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 EMP1P54849 157 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 ARL16Q0P5N6 197 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 PXDC1Q5TGL8 231 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 IGFL4Q6B9Z1 124 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 PATE2Q6UY27 113 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 LINC00299Q6ZSB3 139 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 ZNF546Q86UE3 836 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 C12orf45Q8N5I9 185 aaPredicted RBP6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 RNF182Q8N6D2 247 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 ZNF738Q8NE65 137 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 C2orf50Q96LR7 162 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 RNF126Q9BV68 326 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 GGACTQ9BVM4 153 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 ARV1Q9H2C2 271 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 RNF24Q9Y225 148 aa6.08□□□□□ -1.44
HMGXB4-207ENST00000498212 A0A087X0K7 114 aa6.07□□□□□ -1.44
HMGXB4-207ENST00000498212 TRAV8-2A0A0B4J237 113 aa6.07□□□□□ -1.44
HMGXB4-207ENST00000498212 TEX48A0A1B0GUV7 120 aa6.07□□□□□ -1.44
HMGXB4-207ENST00000498212 HBE1P02100 147 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms