RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OR10G4Q8NGN3 311 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 OR10G9Q8NGN4 311 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 OR10G7Q8NGN6 311 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 FUT9Q9Y231 359 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 U3KQE9 123 aa10.25□□□□□ -0.77
CPNE1-227ENST00000498056 TRAV5A0A0B4J249 113 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 A0A1W2PPV4 95 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 HELTA6NFD8 242 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 G3V4G9 280 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 EIF3GO75821 320 aaKnown RBP eCLIP10.24□□□□□ -0.77
CPNE1-227ENST00000498056 MBP02144 154 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 SEC11BP0C7V7 166 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 TFPI2P48307 235 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 GUCA2BQ16661 112 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 DEFB114Q30KQ6 69 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 STXBP6Q8NFX7 210 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 SEPSECSQ9HD40 501 aaKnown RBP10.24□□□□□ -0.77
CPNE1-227ENST00000498056 RNF24Q9Y225 148 aa10.24□□□□□ -0.77
CPNE1-227ENST00000498056 IZUMO1RA6ND01 250 aa10.23□□□□□ -0.77
CPNE1-227ENST00000498056 OR7C2O60412 319 aa10.23□□□□□ -0.77
CPNE1-227ENST00000498056 RPL7P18124 248 aaKnown RBP10.23□□□□□ -0.77
CPNE1-227ENST00000498056 ATF4P18848 351 aaPredicted RBP10.23□□□□□ -0.77
CPNE1-227ENST00000498056 GALR1P47211 349 aa10.23□□□□□ -0.77
CPNE1-227ENST00000498056 KHDC3LQ587J8 217 aa10.23□□□□□ -0.77
CPNE1-227ENST00000498056 C1orf194Q5T5A4 169 aa10.23□□□□□ -0.77
CPNE1-227ENST00000498056 EIF5AL1Q6IS14 154 aaKnown RBP10.23□□□□□ -0.77
CPNE1-227ENST00000498056 GBGT1Q8N5D6 347 aa10.23□□□□□ -0.77
CPNE1-227ENST00000498056 OR2K2Q8NGT1 345 aa10.23□□□□□ -0.77
CPNE1-227ENST00000498056 PKD1L1Q8TDX9 2849 aa10.23□□□□□ -0.77
CPNE1-227ENST00000498056 HMGB3O15347 200 aaKnown RBP10.22□□□□□ -0.77
CPNE1-227ENST00000498056 TAS2R45P59539 299 aa10.22□□□□□ -0.77
CPNE1-227ENST00000498056 FAM74A1Q5RGS3 127 aa10.22□□□□□ -0.77
CPNE1-227ENST00000498056 ALKAL2Q6UX46 152 aa10.22□□□□□ -0.77
CPNE1-227ENST00000498056 BPIFA4PQ86YQ2 179 aa10.22□□□□□ -0.77
CPNE1-227ENST00000498056 FAM213BQ8TBF2 198 aa10.22□□□□□ -0.77
CPNE1-227ENST00000498056 GPR82Q96P67 336 aa10.22□□□□□ -0.77
CPNE1-227ENST00000498056 SLC25A2Q9BXI2 301 aa10.22□□□□□ -0.77
CPNE1-227ENST00000498056 ACTR3CQ9C0K3 210 aaPredicted RBP10.22□□□□□ -0.77
CPNE1-227ENST00000498056 RPRMQ9NS64 109 aa10.22□□□□□ -0.77
CPNE1-227ENST00000498056 UMAD1C9J7I0 102 aa10.21□□□□□ -0.77
CPNE1-227ENST00000498056 TSPAN4O14817 238 aa10.21□□□□□ -0.77
CPNE1-227ENST00000498056 CD5P06127 495 aa10.21□□□□□ -0.77
CPNE1-227ENST00000498056 SNRPCP09234 159 aaKnown RBP10.21□□□□□ -0.77
CPNE1-227ENST00000498056 PYYP10082 97 aa10.21□□□□□ -0.77
CPNE1-227ENST00000498056 GP9P14770 177 aa10.21□□□□□ -0.77
CPNE1-227ENST00000498056 UBE2L3P68036 154 aaKnown RBP10.21□□□□□ -0.77
CPNE1-227ENST00000498056 SAMD5Q5TGI4 173 aa10.21□□□□□ -0.77
CPNE1-227ENST00000498056 FAM90A2PQ658T7 463 aa10.21□□□□□ -0.77
CPNE1-227ENST00000498056 SSX7Q7RTT5 188 aa10.21□□□□□ -0.77
CPNE1-227ENST00000498056 WFDC3Q8IUB2 231 aa10.21□□□□□ -0.77
CPNE1-227ENST00000498056 IQCF2Q8IXL9 164 aa10.21□□□□□ -0.77
CPNE1-227ENST00000498056 SPAG8Q99932 426 aaPredicted RBP10.21□□□□□ -0.77
CPNE1-227ENST00000498056 TRAV25A0A0B4J276 109 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 CTXND1A0A1B0GTU2 59 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 ZNF785A8K8V0 405 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 H3BTX0 84 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 DNASE2O00115 360 aaPredicted RBP10.2□□□□□ -0.78
CPNE1-227ENST00000498056 WIPF1O43516 503 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 OR10J4P0C629 311 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 ARL14EPLP0DKL9 152 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 FHITP49789 147 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 PAFAH1B2P68402 229 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 RPP25LQ8N5L8 163 aaKnown RBP10.2□□□□□ -0.78
CPNE1-227ENST00000498056 RAB24Q969Q5 203 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 PAXXQ9BUH6 204 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 MS4A6AQ9H2W1 248 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 NRN1Q9NPD7 142 aa10.2□□□□□ -0.78
CPNE1-227ENST00000498056 MAP1LC3B2A6NCE7 125 aa10.19□□□□□ -0.78
CPNE1-227ENST00000498056 OR4C46A6NHA9 309 aa10.19□□□□□ -0.78
CPNE1-227ENST00000498056 ZNF726P1Q15940 193 aa10.19□□□□□ -0.78
CPNE1-227ENST00000498056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.19□□□□□ -0.78
CPNE1-227ENST00000498056 PHYHIPLQ96FC7 376 aa10.19□□□□□ -0.78
CPNE1-227ENST00000498056 FAM167A-AS1Q96KT0 104 aa10.19□□□□□ -0.78
CPNE1-227ENST00000498056 MAP1LC3BQ9GZQ8 125 aa10.19□□□□□ -0.78
CPNE1-227ENST00000498056 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
CPNE1-227ENST00000498056 ZNF256Q9Y2P7 627 aaPredicted RBP10.19□□□□□ -0.78
CPNE1-227ENST00000498056 A0A087X0K7 114 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 A0A1B0GV50 99 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 MRPS12O15235 138 aaKnown RBP10.18□□□□□ -0.78
CPNE1-227ENST00000498056 MEOX2P50222 304 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 FGF8P55075 233 aaPredicted RBP10.18□□□□□ -0.78
CPNE1-227ENST00000498056 CD81P60033 236 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 LCN15Q6UWW0 184 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 DPPA3Q6W0C5 159 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 LRRC20Q8TCA0 184 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 BLNKQ8WV28 456 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 PRR25Q96S07 402 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 OR51M1Q9H341 326 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 TMEM14CQ9P0S9 112 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 SMAD5-AS1Q9Y6J3 95 aa10.18□□□□□ -0.78
CPNE1-227ENST00000498056 ZNF688P0C7X2 276 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 STAG3L2P0CL84 134 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 STAG3L3P0CL85 134 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 IGLC2P0DOY2 106 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 SULT1A2P50226 295 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 RAB5CP51148 216 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 EGFEM1PQ0D2K5 195 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 PQLC2Q6ZP29 291 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 GTSCR1Q86UQ5 136 aa10.17□□□□□ -0.78
CPNE1-227ENST00000498056 FAM24BQ8N5W8 94 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms